BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC5ZH11RM1.SCF screened BAC_end (944 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1716 1098 0.0 >3x_Contig1716 Length = 19108 Score = 1098 bits (554), Expect = 0.0 Identities = 634/654 (96%), Gaps = 5/654 (0%) Strand = Plus / Minus Query: 45 ctttttgttgttaaaatactattcgcgcatgcaatgttgagaaaaaggataaaacaaatt 104 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14987 ctttttgttgttaaaatactattcgcgcatgcaatgttgagaaaaaggataaaacaaatt 14928 Query: 105 aaagaaaactcgtagctagtaactgtttgggcttaatctcattactcatttagtataacc 164 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14927 aaagaaaactcgtagctagtaactgtttgggcttaatctcattactcatttagtataacc 14868 Query: 165 acggtctaataagcaaatgctatgaagtatgtctgatggtagcgttatatctctttttta 224 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 14867 acggtctaataagcaaatgctatgaagtatgtctgatggtagcgttatatccgccgttta 14808 Query: 225 aaccgcagaaactttaattttactaacacttataacatcaaaagaacattcttcattaca 284 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14807 aaccgcagaaactttaattttactaacacttataacatcaaaagaacattcttcattaca 14748 Query: 285 ggagatgtgcctgttgggtatcaggtgcccgatttcccatccttatattggcccatgaac 344 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14747 ggagatgtgcctgttgggtatcaggtgcccgatttcccatccttatattggcccatgaac 14688 Query: 345 aatggtaagttcagcgtcgcatatctctactacctccccgatatatggaggtttacgatc 404 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14687 aatggtaagttcagcgtcgcatatctctactacctccccgatatatggaggtttacgatc 14628 Query: 405 ttctggaccatgattctatttgcaatagtatacggaactacaggtgcaatcgcatggact 464 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14627 ttctggaccatgattctatttgcaatagtatacggaactacaggtgcaatcgcatggact 14568 Query: 465 acacacaagaaaatcttattcggcttttggatgatcccattgtatataatgataggcatg 524 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14567 acacacaagaaaatcttattcggcttttggatgatcccattgtatataatgataggcatg 14508 Query: 525 gcgcaagcgtttgtcttgggaactgtggtgggtatattgatcgcgatc-tatataatgca 583 ||||| |||||||||| ||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 14507 gcgcaggcgtttgtctcgggaactgtggtgggtatattgatcgcgatcatatataaggca 14448 Query: 584 gggttatttgcaatgtctacatgggattcccttatgctgtgctgggggcccaaattttat 643 |||||||||||||||||||||| |||||||||||||||||||| | || ||||||||||| Sbjct: 14447 gggttatttgcaatgtctacat-ggattcccttatgctgtgct-gtggtccaaattttat 14390 Query: 644 ttaacgggagcacaaattacttcgaagaccaattccgatcatatgaatgatgta 697 |||||| |||||||| |||| |||| || ||| ||||||||||||| ||||||| Sbjct: 14389 ttaacgtgagcacaagttac-tcgatga-caagtccgatcatatgagtgatgta 14338 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8519 Number of Sequences: 1807 Number of extensions: 8519 Number of successful extensions: 82 Number of sequences better than 1.0e-20: 1 length of query: 944 length of database: 10,358,551 effective HSP length: 16 effective length of query: 928 effective length of database: 10,329,639 effective search space: 9585904992 effective search space used: 9585904992 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)