BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC6ZA03FM1.SCF screened BAC_end (961 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1588 1033 0.0 >3x_Contig1588 Length = 14692 Score = 1033 bits (521), Expect = 0.0 Identities = 547/556 (98%) Strand = Plus / Minus Query: 87 tggcagattccaaatcctctggaacaaaccaatctctttcgtgaatcgacggatcagttt 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5726 tggcagattccaaatcctctggaacaaaccaatctctttcgtgaatcgacggatcagttt 5667 Query: 147 ccggtgtacgcacatccttgttttcttgaacgttgatacaaactttctcaccacgtctag 206 ||||||||||||||||||||| | | ||||||||||||||||||||||||||||||||| Sbjct: 5666 ccggtgtacgcacatccttgtatacaggaacgttgatacaaactttctcaccacgtctag 5607 Query: 207 tcctaatattggctgncatcgtggggaacctatcttgcctattgataatctcatcgggta 266 ||||||||||||||| || ||||||||||||| | ||||||||||||||||||||||||| Sbjct: 5606 tcctaatattggctgtcaacgtggggaacctagcgtgcctattgataatctcatcgggta 5547 Query: 267 aaaacagcgacctactagccgaatttttatgatcccatgggttcttcaaattcgtaaaat 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5546 aaaacagcgacctactagccgaatttttatgatcccatgggttcttcaaattcgtaaaat 5487 Query: 327 tgtcacgacccatgcgtgggaaaacagccaacgacaacggagtcaccaagttcacgtcgt 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5486 tgtcacgacccatgcgtgggaaaacagccaacgacaacggagtcaccaagttcacgtcgt 5427 Query: 387 taaatttcttcaatttctgttctgccacggccctgcgcatctgcatgttcctctcaacct 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5426 taaatttcttcaatttctgttctgccacggccctgcgcatctgcatgttcctctcaacct 5367 Query: 447 ctgcaccctcgaagtccttatatggcttcgcaggtgtcgcctccaacataaaccgaccgt 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5366 ctgcaccctcgaagtccttatatggcttcgcaggtgtcgcctccaacataaaccgaccgt 5307 Query: 507 actcgggatggaaatgaacgttcaactcgtcacactcggcctggtattccgtattcaact 566 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5306 actcgggatggaaatgaacgttcaactcgtcacactcggcctggtattccgtattcaact 5247 Query: 567 gaaccaaaacctcatcatgtttcacactaagaacaacgttctcattagcctcatcgaact 626 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5246 gaaccaaaacctcatcatgtttcacactaagaacaacgttctcattagcctcatcgaact 5187 Query: 627 cacaaataatatactc 642 ||||||| |||||||| Sbjct: 5186 cacaaatcatatactc 5171 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7200 Number of Sequences: 1807 Number of extensions: 7200 Number of successful extensions: 78 Number of sequences better than 1.0e-20: 1 length of query: 961 length of database: 10,358,551 effective HSP length: 16 effective length of query: 945 effective length of database: 10,329,639 effective search space: 9761508855 effective search space used: 9761508855 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)