BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC6ZA05RM1.SCF screened BAC_end (910 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1335 1326 0.0 >3x_Contig1335 Length = 8696 Score = 1326 bits (669), Expect = 0.0 Identities = 739/753 (98%), Gaps = 7/753 (0%) Strand = Plus / Minus Query: 53 attaatcagattttctcacttaaaacactaagatactatgtcaattcctagtaaatccta 112 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5992 attaatcagattttctcacttaaaacactaagatactatgtcaattcctagtaaatccta 5933 Query: 113 ctaatttgcttctgaactttattgatctcgcgtaaacacttacctgaggacatatgcttc 172 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5932 ctaatttgcttctgaactttattgatctcgcgtaaacacttacctgaggacatatgcttc 5873 Query: 173 gatcattagacagatctctttgtattctgtacttttccaaggtttcgacacgattttttt 232 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5872 gatcattagacagatctctttgtattctgtacttttccaaggtttcgacacgattttttt 5813 Query: 233 cgattctaaatagagaatttccgaaaacggtagataaacgtgactatcatgtggatagaa 292 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5812 cgattctaaatagagaatttccgaaaacggtagataaacgtgactatcatgtggatagaa 5753 Query: 293 atggggaaggtgacaacacttggattcgggattcggtgaggaaccacaatatacctagaa 352 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5752 atggggaaggtgacaacacttggattcgggattcggtgaggaaccacaatatacctagaa 5693 Query: 353 aagtatcctagattcattgaacaacaggtagttcttaatgattaaattacggtatacatt 412 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5692 aagtatcctagattcattgaacaacaggtagttcttaatgattaaattacggtatacatt 5633 Query: 413 ttccaatgttcacgtgactcaaaactgtcatgtgaccgacacaaagaatacactacttag 472 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5632 ttccaatgttcacgtgactcaaaactgtcatgtgaccgacacaaagaatacactacttag 5573 Query: 473 atttcccaattaggagaaacgtaaacattgaaatagtgatataaagtcatagaaatgcaa 532 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5572 atttcccaattaggagaaacgtaaacattgaaatagtgatataaagtcatagaaatgcaa 5513 Query: 533 tgctacatgtgtagaaaccacattacagtgttcatcacgacaacctataaaactgctatt 592 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5512 tgctacatgtgtagaaaccacattacagtgttcatcacgacaacctataaaactgctatt 5453 Query: 593 caggagccaggtactaaataagatcaaacagatacaagccctagttcaaagtagctcaaa 652 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 5452 caggagccaggtactaaataagatcaaacagatacaag-cctagttcaaagtagctcaaa 5394 Query: 653 gaataatgactggcgggcaatttcaaccattacattcag-aacaggattctcaaactgcg 711 |||||||||||| ||| ||||||||||||||||| |||| |||||||||||||||||||| Sbjct: 5393 gaataatgactgccggccaatttcaaccattaca-tcagaaacaggattctcaaactgcg 5335 Query: 712 agtacaagtttgcacaatgcccatgttttaagaaccatcaccccaccagctttcagaaat 771 ||||||||||||||||| | |||||||| | |||||||||| ||||||||||||||||| Sbjct: 5334 agtacaagtttgcacaa-ggccatgtttaagaaaccatcaccacaccagctttcagaaat 5276 Query: 772 gaagaaacaagttttgcttcttcctaccgatga 804 |||| |||||| |||||||| |||||||||||| Sbjct: 5275 gaag-aacaag-tttgcttc-tcctaccgatga 5246 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6546 Number of Sequences: 1807 Number of extensions: 6546 Number of successful extensions: 51 Number of sequences better than 1.0e-20: 1 length of query: 910 length of database: 10,358,551 effective HSP length: 16 effective length of query: 894 effective length of database: 10,329,639 effective search space: 9234697266 effective search space used: 9234697266 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)