BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC6ZA07FM1.SCF screened BAC_end (866 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1423 977 0.0 >3x_Contig1423 Length = 8454 Score = 977 bits (493), Expect = 0.0 Identities = 546/557 (98%), Gaps = 5/557 (0%) Strand = Plus / Plus Query: 73 tgactccttccccaatggatgtctacgccgactacgccactgcttccaagaagaagttgt 132 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5511 tgactccttccccaatggatgtctacgccgactacgccactgcttccaagaagaagttgt 5570 Query: 133 aaatgtcatctttaaaatattataactgtgctgtatagatatttttttatagctgtcagt 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5571 aaatgtcatctttaaaatattataactgtgctgtatagatatttttttatagctgtcagt 5630 Query: 193 atgttttctctgattcaataatatattgttgacattttaccaattgttcctcttctcttc 252 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5631 atgttttctctgaaacaataatatattgttgacattttaccaattgttcctcttctcttc 5690 Query: 253 acaagctacatatcatatatattcacactcattataattgaccttaaccctttaggatcg 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5691 acaagctacatatcatatatattcacactcattataattgaccttaaccctttaggatcg 5750 Query: 313 atcataataaatgatcaatatacgtgacaaactaactaa-gggaaactatatgactgtcc 371 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 5751 atcataataaatgatcaatatacgtgacaaactaactaaggggaaactatatgactgtcc 5810 Query: 372 tatacacttcgtagcaagaaaaaccagagaaaaagacatatggtaaaaaaaagagatagt 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5811 tatacacttcgtagcaagaaaaaccagagaaaaagacatatggtaaaaaaaagagatagt 5870 Query: 432 gataaaatcaaggtaaaagggatttctcttatatgaccattagagtacaggtcaagatac 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5871 gataaaatcaaggtaaaagggatttctcttatatgaccattagagtacaggtcaagatac 5930 Query: 492 gccaatcatattaataggccttctggaatttaaacactgccagtctcttttttacagtaa 551 |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 5931 gccaatcatattaatagg-cttctggaatttaaacactgccagtctcttttttacagtag 5989 Query: 552 tcttttcttccgggtgacccttttttttttattactttacagtattttttttccctttta 611 || |||||||||| ||| |||||||||||||||||||||||||| ||||||| ||||||| Sbjct: 5990 tc-tttcttccggttga-ccttttttttttattactttacagta-tttttttacctttta 6046 Query: 612 aaacttttttttttttt 628 | ||||||||||||||| Sbjct: 6047 agacttttttttttttt 6063 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 35,190 Number of Sequences: 1807 Number of extensions: 35190 Number of successful extensions: 2921 Number of sequences better than 1.0e-20: 1 length of query: 866 length of database: 10,358,551 effective HSP length: 16 effective length of query: 850 effective length of database: 10,329,639 effective search space: 8780193150 effective search space used: 8780193150 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)