BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC6ZA11RM1.SCF screened BAC_end (911 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig751 1281 0.0 >3x_Contig751 Length = 2335 Score = 1281 bits (646), Expect = 0.0 Identities = 736/757 (97%), Gaps = 7/757 (0%) Strand = Plus / Minus Query: 45 gcttgagtcagaatagaagaaagaatcatcgttcattgaccaatttccaaattcttcagg 104 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1807 gcttgagtcagaatagaagaaagaatcatcgttcattgaccaatttccaaattcttcagg 1748 Query: 105 gttctcattaaagacaccatccctcttaaaatgcgaaagaaacgaccccaatccttctat 164 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1747 gttctcattaaagacaccatccctcttaaaatgcgaaagaaacgaccccaatccttctat 1688 Query: 165 gtcatgcaatttaattaaaagagtgagcaataaggtaatatgatcaacttttgccttccc 224 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1687 gtcatgcaatttaattaaaagagtgagcaataaggtaatatgatcaacttttgccttccc 1628 Query: 225 atctttaactagtttccagaggaaatccttaagatttattgaatcctctgaattcgtttt 284 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1627 atctttaactagtttccagaggaaatccttaagatttattgaatcctctgaattcgtttt 1568 Query: 285 gtgctcgacgccaaattttgatattatttctgttggatcacaaacttcaatgcatcccat 344 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1567 gtgctcgacgccaaattttgatattatttctgttggatcacaaacttcaatgcatcccat 1508 Query: 345 atactgttcaattgcttcccttttggaaccctttttgaaaagatagtcaccgtatgactt 404 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1507 atactgttcaattgcttcccttttggaaccctttttgaaaagatagtcaccgtatgactt 1448 Query: 405 tttaatctcttgaactttcacgtctggaagagaatgctgtttggcaagttctaatgctac 464 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1447 tttaatctcttgaactttcacgtctggaagagaatgctgtttggcaagttctaatgctac 1388 Query: 465 tgaatacatgtccttttgacatatggtgttcaattgatcgtctaacttcttttgccttaa 524 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1387 tgaatacatgtccttttgacatatggtgttcaattgatcgtctaacttcttttgccttaa 1328 Query: 525 tttgtgaatcacaccgttagaagttaaaaggttgacacttgccccatcactaaagatatc 584 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1327 tttgtgaatcacaccgttagaagttaaaaggttgacacttgccccatcactaaagatatc 1268 Query: 585 aatcacagagctggtgataagtaagctgtaagagattatcttggtcttaatatctangat 644 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 1267 aatcacagagctggtgataagtaagctgtaagagattatcttggtcttaatatctaggat 1208 Query: 645 gactgcccgaatgttcttaatttgggtcttaccccaatgcaaagaggaagtttgtaatat 704 ||||||||||||| ||| | || ||||||||||| ||||||||||||||| | ||||||| Sbjct: 1207 gactgcccgaatggtctcatttggggtcttacccaaatgcaaagaggaag-tcgtaatat 1149 Query: 705 ttgacacaagtacctaggattttatctgccggatattggaaaagaatcgttttggctttg 764 |||||||||||| ||||||| | ||||| |||||||||| ||||| |||||| ||| | Sbjct: 1148 ttgacacaagta-ctaggatatgatctg-cggatattgg-aaagatacgtttt-gctgt- 1094 Query: 765 ggggatttcaacaattaaacaatcgtttacttccaga 801 |||||| ||||||||| ||| |||||||||||||||| Sbjct: 1093 ggggatatcaacaatt-aacgatcgtttacttccaga 1058 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7422 Number of Sequences: 1807 Number of extensions: 7422 Number of successful extensions: 54 Number of sequences better than 1.0e-20: 1 length of query: 911 length of database: 10,358,551 effective HSP length: 16 effective length of query: 895 effective length of database: 10,329,639 effective search space: 9245026905 effective search space used: 9245026905 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)