BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC6ZA11RM1.SCF screened BAC_end
         (911 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig751                                                         1281   0.0  

>3x_Contig751 
          Length = 2335

 Score = 1281 bits (646), Expect = 0.0
 Identities = 736/757 (97%), Gaps = 7/757 (0%)
 Strand = Plus / Minus

                                                                        
Query: 45   gcttgagtcagaatagaagaaagaatcatcgttcattgaccaatttccaaattcttcagg 104
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1807 gcttgagtcagaatagaagaaagaatcatcgttcattgaccaatttccaaattcttcagg 1748

                                                                        
Query: 105  gttctcattaaagacaccatccctcttaaaatgcgaaagaaacgaccccaatccttctat 164
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1747 gttctcattaaagacaccatccctcttaaaatgcgaaagaaacgaccccaatccttctat 1688

                                                                        
Query: 165  gtcatgcaatttaattaaaagagtgagcaataaggtaatatgatcaacttttgccttccc 224
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1687 gtcatgcaatttaattaaaagagtgagcaataaggtaatatgatcaacttttgccttccc 1628

                                                                        
Query: 225  atctttaactagtttccagaggaaatccttaagatttattgaatcctctgaattcgtttt 284
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1627 atctttaactagtttccagaggaaatccttaagatttattgaatcctctgaattcgtttt 1568

                                                                        
Query: 285  gtgctcgacgccaaattttgatattatttctgttggatcacaaacttcaatgcatcccat 344
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1567 gtgctcgacgccaaattttgatattatttctgttggatcacaaacttcaatgcatcccat 1508

                                                                        
Query: 345  atactgttcaattgcttcccttttggaaccctttttgaaaagatagtcaccgtatgactt 404
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1507 atactgttcaattgcttcccttttggaaccctttttgaaaagatagtcaccgtatgactt 1448

                                                                        
Query: 405  tttaatctcttgaactttcacgtctggaagagaatgctgtttggcaagttctaatgctac 464
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1447 tttaatctcttgaactttcacgtctggaagagaatgctgtttggcaagttctaatgctac 1388

                                                                        
Query: 465  tgaatacatgtccttttgacatatggtgttcaattgatcgtctaacttcttttgccttaa 524
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1387 tgaatacatgtccttttgacatatggtgttcaattgatcgtctaacttcttttgccttaa 1328

                                                                        
Query: 525  tttgtgaatcacaccgttagaagttaaaaggttgacacttgccccatcactaaagatatc 584
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1327 tttgtgaatcacaccgttagaagttaaaaggttgacacttgccccatcactaaagatatc 1268

                                                                        
Query: 585  aatcacagagctggtgataagtaagctgtaagagattatcttggtcttaatatctangat 644
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1267 aatcacagagctggtgataagtaagctgtaagagattatcttggtcttaatatctaggat 1208

                                                                        
Query: 645  gactgcccgaatgttcttaatttgggtcttaccccaatgcaaagaggaagtttgtaatat 704
            ||||||||||||| ||| | || ||||||||||| ||||||||||||||| | |||||||
Sbjct: 1207 gactgcccgaatggtctcatttggggtcttacccaaatgcaaagaggaag-tcgtaatat 1149

                                                                        
Query: 705  ttgacacaagtacctaggattttatctgccggatattggaaaagaatcgttttggctttg 764
            |||||||||||| ||||||| | ||||| |||||||||| |||||  |||||| ||| | 
Sbjct: 1148 ttgacacaagta-ctaggatatgatctg-cggatattgg-aaagatacgtttt-gctgt- 1094

                                                 
Query: 765  ggggatttcaacaattaaacaatcgtttacttccaga 801
            |||||| ||||||||| ||| ||||||||||||||||
Sbjct: 1093 ggggatatcaacaatt-aacgatcgtttacttccaga 1058


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7422
Number of Sequences: 1807
Number of extensions: 7422
Number of successful extensions: 54
Number of sequences better than 1.0e-20: 1
length of query: 911
length of database: 10,358,551
effective HSP length: 16
effective length of query: 895
effective length of database: 10,329,639
effective search space: 9245026905
effective search space used: 9245026905
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)