BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC6ZB04FM1.SCF screened BAC_end (924 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1272 1128 0.0 >3x_Contig1272 Length = 8315 Score = 1128 bits (569), Expect = 0.0 Identities = 629/643 (97%), Gaps = 6/643 (0%) Strand = Plus / Minus Query: 130 agcagtcaacacattgcttttcaaggaagcgatttcagggtttgttctactattcacaat 189 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 8315 agcagtcaacacattgcttttcaaggaagcgatttcagggtttgt-ctactattcacaat 8257 Query: 190 tgctatcttctggttgagattaaactttttttcttacacgcaagcaactttattgaaatt 249 ||||||||||||||||||||||||||| | | |||||||||||||||||||||||||||| Sbjct: 8256 tgctatcttctggttgagattaaacttctctccttacacgcaagcaactttattgaaatt 8197 Query: 250 gttgttaaaagttgacaagaaggttcctgaaagtcagaaagagaaatggaatttcattaa 309 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8196 gttgttaaaagttgacaagaaggttcctgaaagtcagaaagagaaatggaatttcattaa 8137 Query: 310 gggcttcctatacaacagaatgaaggaaagagaacaggctttacagagattcaaaattga 369 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8136 gggcttcctatacaacagaatgaaggaaagagaacaggctttacagagattcaaaattga 8077 Query: 370 tacatgaattggaagaaaagaagctcaatttaacgtttcaagtataccattcttttcaac 429 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8076 tacatgaattggaagaaaagaagctcaatttaacgtttcaagtataccattcttttcaac 8017 Query: 430 attcatttgtgtgagcctttctatatttcaagtataagacgtttttattaataaacgtta 489 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8016 attcatttgtgtgagcctttctatatttcaagtataagacgtttttattaataaacgtta 7957 Query: 490 gtgtataagtgaataaaacaagcaaaagttgtatgcttaacttaaacacaattaagatta 549 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7956 gtgtataagtgaataaaacaagcaaaagttgtatgcttaacttaaacacaattaagatta 7897 Query: 550 taatattagatattcttactccagacttcatgcttatttcagatttattgagcttggtaa 609 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7896 taatattagatattcttactccagacttcatgcttatttcagatttattgagcttggtaa 7837 Query: 610 attagttatcttcctgtaatttttggttcagaagcagaactgataatttangattcatca 669 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 7836 attagttatcttcctgtaatttttggttcagaagcagaactgataatttaggattcatca 7777 Query: 670 caataagcaattcaatcagaagtagaagttattgaatttcaagaaatggagtcagttatt 729 ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||| Sbjct: 7776 caataagcaattcaatcagaagtagaagtaattgaa-ttcaagaaatggagtcagttatg 7718 Query: 730 atttaggtattttctcaaacccaacaaaaacgttagaaatgat 772 | ||||||| | |||||| |||||||||||| |||||||||| Sbjct: 7717 a-ttaggtagtatctcaa--ccaacaaaaacg-tagaaatgat 7679 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 9792 Number of Sequences: 1807 Number of extensions: 9792 Number of successful extensions: 46 Number of sequences better than 1.0e-20: 1 length of query: 924 length of database: 10,358,551 effective HSP length: 16 effective length of query: 908 effective length of database: 10,329,639 effective search space: 9379312212 effective search space used: 9379312212 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)