BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC6ZB04RM1.SCF screened BAC_end (915 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1610 1332 0.0 >3x_Contig1610 Length = 13981 Score = 1332 bits (672), Expect = 0.0 Identities = 730/739 (98%), Gaps = 9/739 (1%) Strand = Plus / Plus Query: 49 gcttcaaagaatttctttccttcacatctatttatcaaacaaaaacaactagaaaacatt 108 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3277 gcttcaaagaatttctttccttcacatctatttatcaaacaaaaacaactagaaaacatt 3336 Query: 109 tcgtaaacaaaagaacttaggatccaagaaacagggaaacatttcactttgtatccttgc 168 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3337 tcgtaaacaaaagaacttaggatccaagaaacagggaaacatttcactttgtatccttgc 3396 Query: 169 gtttaggtgtcttgtgcaagggagaacggttcgtgagacacttgatcgagagttcatact 228 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3397 gtttaggtgtcttgtgcaagggagaacggttcgtgagacacttgatcgagagttcatact 3456 Query: 229 cagaaactcgttagtaggcgccgaataattacagaataaaggaagatctaacgtcgctat 288 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3457 cagaaactcgttagtaggcgccgaataattacagaataaaggaagatctaacgtcgctat 3516 Query: 289 tcgatatactgatacttttataaagtgaaccaagtgtgaaaatttattatttgccgtttg 348 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3517 tcgatatactgatacttttataaagtgaaccaagtgtgaaaatttattatttgccgtttg 3576 Query: 349 ctgttgcagttccttgttttatttctataattttggagactgactattgaaacgacccgc 408 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3577 ctgttgcagttccttgttttatttctataattttggagactgactattgaaacgacccgc 3636 Query: 409 taggatttggaaacactagtaagttataataccctttacaaatcgttatgtcagcttccg 468 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3637 taggatttggaaacactagtaagttataataccctttacaaatcgttatgtcagcttccg 3696 Query: 469 aggttgcccagtttttggaaaacattatcattactccggacccaacggtccgtcttcaag 528 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3697 aggttgcccagtttttggaaaacattatcattactccggacccaacggtccgtcttcaag 3756 Query: 529 cggagacgacgttgaagaaattatctaacgataatttcttgcaattcgctggacttttgt 588 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3757 cggagacgacgttgaagaaattatctaacgataatttcttgcaattcgctggacttttgt 3816 Query: 589 ctcagatcttggccgatgtgtccgttcgtcttgaagctagaattctagcaggtttgacgt 648 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3817 ctcagatcttggccgatgtgtccgttcgtcttgaagctagaattctagcaggtttgacgt 3876 Query: 649 tgaagaacgaattgatttcgaagaacccaacaaaggcccagcagttttgctcaacgtttg 708 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 3877 tgaagaacgaattgatttcgaagaacccaacaaaggcccagcag-tttgctcaacg-ttg 3934 Query: 709 gtctacgcaagttcgatgccagagtctagacatcatatttaagcaggtttgcgttaccaa 768 ||||||||||| |||||| |||||||||||||||||| ||||||| |||||||||| ||| Sbjct: 3935 gtctacgcaag-tcgatg-cagagtctagacatcata-ttaagca-gtttgcgtta-caa 3989 Query: 769 gcgtttgggttgatccaga 787 ||||| |||||||||||| Sbjct: 3990 gcgtt--ggttgatccaga 4006 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7261 Number of Sequences: 1807 Number of extensions: 7261 Number of successful extensions: 47 Number of sequences better than 1.0e-20: 1 length of query: 915 length of database: 10,358,551 effective HSP length: 16 effective length of query: 899 effective length of database: 10,329,639 effective search space: 9286345461 effective search space used: 9286345461 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)