BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC6ZB07FM1.SCF screened BAC_end (901 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1647 1275 0.0 >3x_Contig1647 Length = 14353 Score = 1275 bits (643), Expect = 0.0 Identities = 700/715 (97%), Gaps = 3/715 (0%) Strand = Plus / Minus Query: 87 tcaatctgctgtaaatattcttggtaaggtatttcaacgaaagcttcatactccttgtat 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1586 tcaatctgctgtaaatattcttggtaaggtatttcaacgaaagcttcatactccttgtat 1527 Query: 147 acaaattgggatgcaatgatttcttgttccttcactagatactgttccaatatggccttt 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1526 acaaattgggatgcaatgatttcttgttccttcactagatactgttccaatatggccttt 1467 Query: 207 gcattgttgaactatgcgttcaattttttgtcttcaggagcatcaatgaaattcaacggt 266 |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1466 gcattgttgaacaaggcgttcaattttttgtcttcaggagcatcaatgaaattcaacggt 1407 Query: 267 aactctcctacggagttaactggataatttgcaccaattaagtatgacattaaggatgca 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1406 aactctcctacggagttaactggataatttgcaccaattaagtatgacattaaggatgca 1347 Query: 327 atatctgcttggttaacatcatttctctttatgtcagcaagattccaattttcagtataa 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1346 atatctgcttggttaacatcatttctctttatgtcagcaagattccaattttcagtataa 1287 Query: 387 ttatcaaaaattggagcttgatttttgactggtttgtttataccggcaccccatgcgact 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1286 ttatcaaaaattggagcttgatttttgactggtttgtttataccggcaccccatgcgact 1227 Query: 447 aagggtgtacgggtattatttggatgaccatcaccatgagaaccaaaagcactcattccg 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1226 aagggtgtacgggtattatttggatgaccatcaccatgagaaccaaaagcactcattccg 1167 Query: 507 tgatcggccgtgaagatgaaggcggtgtcttcatcatcgaaaaattcatgaaccttttcc 566 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1166 tgatcggccgtgaagatgaaggcggtgtcttcatcatcgaaaaattcatgaaccttttcc 1107 Query: 567 accagtaatttcacctccttatcaatatatttcacgttgtcataatattcagctgagtaa 626 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1106 accagtaatttcacctccttatcaatatatttcacgttgtcataatattcagctgagtaa 1047 Query: 627 ggtctgttagaatgtgccgccgtattacagcctaaaaggtgtagaaaaaatacgttttcc 686 ||||||| |||||| | ||||||| |||||||||||||||||||||||||||| ||||| Sbjct: 1046 ggtctgtaagaatggccggccgtatcacagcctaaaaggtgtagaaaaaatacg-tttcc 988 Query: 687 atcttgttttatttcagttttcagggtcttattggattttggattggtgaatagctcata 746 |||||||||||||||||||| |||||||||||||||||||| |||| ||||||||||||| Sbjct: 987 atcttgttttatttcagtttccagggtcttattggattttgtattgttgaatagctcata 928 Query: 747 aatatgtttgaaaacaaatgcatccaattcgatggaaagattgagttaaaatctt 801 |||||| ||||||||||||||||||||||||||| ||||||||| ||||||||| Sbjct: 927 gatatgtctgaaaacaaatgcatccaattcgatgg-aagattgag-taaaatctt 875 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7926 Number of Sequences: 1807 Number of extensions: 7926 Number of successful extensions: 38 Number of sequences better than 1.0e-20: 1 length of query: 901 length of database: 10,358,551 effective HSP length: 16 effective length of query: 885 effective length of database: 10,329,639 effective search space: 9141730515 effective search space used: 9141730515 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)