BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC6ZB08RM1.SCF screened BAC_end (900 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1762 1515 0.0 >3x_Contig1762 Length = 22098 Score = 1515 bits (764), Expect = 0.0 Identities = 796/803 (99%), Gaps = 3/803 (0%) Strand = Plus / Plus Query: 43 tataactcca-ggtctaacccatgtcggtaggttcaaagagttgacttggccccaaagac 101 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12569 tataactccaaggtctaacccatgtcggtaggttcaaagagttgacttggccccaaagac 12628 Query: 102 gcgaaatggcgtttaatggcaacgtactgtaacagaaaaacagccagttattattgaata 161 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12629 gcgaaatggcgtttaatggcaacgtactgtaacagaaaaacagccagttattattgaata 12688 Query: 162 ttttaatacgatacttccccttcactttatcctgcgaatctccttccaccacatcgccag 221 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12689 ttttaatacgatacttccccttcactttatcctgcgaatctccttccaccacatcgccag 12748 Query: 222 attccgctacttttatcctttggtaatgctgatttatcaagtacgaactaatgattaacg 281 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12749 attccgctacttttatcctttggtaatgctgatttatcaagtacgaactaatgattaacg 12808 Query: 282 taaaactagtcgcgacaacccacttcaccatgcgttttttcgaattctccggtctcacaa 341 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12809 taaaactagtcgcgacaacccacttcaccatgcgttttttcgaattctccggtctcacaa 12868 Query: 342 tgggacccgatgacataaacctctggctaagcaacatcttcgtcttatttttcaaataag 401 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12869 tgggacccgatgacataaacctctggctaagcaacatcttcgtcttatttttcaaataag 12928 Query: 402 gacctgacacacgttgtggaacctgtggccacggaatccgcgacattgtcaacgatacgt 461 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12929 gacctgacacacgttgtggaacctgtggccacggaatccgcgacattgtcaacgatacgt 12988 Query: 462 tcctagatattccaatcattgcgagtatctaaccaccgacacaaaaattcaaaaagaaaa 521 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12989 tcctagatattccaatcattgcgagtatctaaccaccgacacaaaaattcaaaaagaaaa 13048 Query: 522 cagtcaaataattaccttttaccttgtaatcaccaaaaaacacaacacaaaacacaaaac 581 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13049 cagtcaaataattaccttttaccttgtaatcaccaaaaaacacaacacaaaacacaaaac 13108 Query: 582 actaaccaacagccttaggaaaaccaactactaatacactgcanactcttttctatcttc 641 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 13109 actaaccaacagccttaggaaaaccaactactaatacactgcaaactcttttctatcttc 13168 Query: 642 tagtaccacgctaaggacaattttggcgcgctgctccaaattatctctctagaaaatcca 701 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13169 tagtaccacgctaaggacaattttggcgcgctgctccaaattatctctctagaaaatcca 13228 Query: 702 tgtgccgatcttaaatacattctctatacaggaaaacctcttattctaaagcttttttta 761 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13229 tgtgccgatcttaaatacattctctatacaggaaaacctcttattctaaagcttttttta 13288 Query: 762 tataaagaaatcctcgaaggcctttaagtgaaatgtgaaaaatgtg-aaatgaacttacc 820 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| Sbjct: 13289 tataaagaaatcctcgaaggcctttaagtgaaatgtgaaaaatgtgaaaatgaactaacc 13348 Query: 821 gaacaagatgggggaaagcgcat 843 |||| ||| ||||||||||||| Sbjct: 13349 gaac-agaatggggaaagcgcat 13370 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6445 Number of Sequences: 1807 Number of extensions: 6445 Number of successful extensions: 57 Number of sequences better than 1.0e-20: 1 length of query: 900 length of database: 10,358,551 effective HSP length: 16 effective length of query: 884 effective length of database: 10,329,639 effective search space: 9131400876 effective search space used: 9131400876 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)