BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC6ZB12FM1.SCF screened BAC_end (925 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1118 1134 0.0 >3x_Contig1118 Length = 5540 Score = 1134 bits (572), Expect = 0.0 Identities = 600/608 (98%), Gaps = 1/608 (0%) Strand = Plus / Plus Query: 87 ctttttttgacaggttcgctcatggttattactcggttttttcagaaaggtttgaaagtt 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1412 ctttttttgacaggttcgctcatggttattactcggttttttcagaaaggtttgaaagtt 1471 Query: 147 atgaatggcctctgattttccataattcgcactcttctgaatgaatccttcgagtaacgt 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1472 atgaatggcctctgattttccataattcgcactcttctgaatgaatccttcgagtaacgt 1531 Query: 207 aaagtccgatttattaatagtgggaggacagtattatctaatggtttctttgcattattc 266 ||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 1532 aaagtccgaagtataataagtgggaggacagtattatctaatggtttctttgcattattc 1591 Query: 267 tcccttgtcaccagctttatttaccttatatcataacttagaaaccttcaaaagtttaat 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1592 tcccttgtcaccagctttatttaccttatatcataacttagaaaccttcaaaagtttaat 1651 Query: 327 gtttttaagaacagaattatcacttggtacgttttgatagtttgcccaaacagaagatcc 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1652 gtttttaagaacagaattatcacttggtacgttttgatagtttgcccaaacagaagatcc 1711 Query: 387 gcggcgtattattacagagtagtgtttaggctactatatactttgtatgggtatccctaa 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1712 gcggcgtattattacagagtagtgtttaggctactatatactttgtatgggtatccctaa 1771 Query: 447 aattgcgttttatatcatacaatctcacagagagagttcaccgaattccgagatggactc 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1772 aattgcgttttatatcatacaatctcacagagagagttcaccgaattccgagatggactc 1831 Query: 507 gaatgactgtttccgacagttatcattgattgagtcacaattgttaagccaatctttcca 566 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 1832 gaatgactgtttccgacagttatcattgattgagtcacaattgttaagccaatcttccca 1891 Query: 567 ttccattagttggaataacaaactcatatttggacttatttctctggcgacagacttcaa 626 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1892 ttccattagttggaataacaaactcatatttggacttatttctctggcgacagacttcaa 1951 Query: 627 tttattatatgcttcattcaaccttaatttgtcgtatctcatcatgtaagctactattca 686 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| Sbjct: 1952 tttattatatgcttcattcaagcttaatttgtcgtatctcatcatgtaagctacta-tca 2010 Query: 687 aggaagct 694 |||||||| Sbjct: 2011 aggaagct 2018 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 14,118 Number of Sequences: 1807 Number of extensions: 14118 Number of successful extensions: 108 Number of sequences better than 1.0e-20: 1 length of query: 925 length of database: 10,358,551 effective HSP length: 16 effective length of query: 909 effective length of database: 10,329,639 effective search space: 9389641851 effective search space used: 9389641851 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)