BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC6ZB12RM1.SCF screened BAC_end (924 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1128 509 e-144 >3x_Contig1128 Length = 4759 Score = 509 bits (257), Expect = e-144 Identities = 275/280 (98%), Gaps = 1/280 (0%) Strand = Plus / Plus Query: 23 gcttgcttttcttcttcgaaatgagcagaatcagttggccaaatacccaagaaaatggta 82 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4480 gcttgcttttcttcttcgaaatgagcagaatcagttggccaaatacccaagaaaatggta 4539 Query: 83 aatccggcttcttctgcagcaggacccaaaatttgtaaagtgttacaatcagaagcagca 142 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4540 aatccggcttcttctgcagcaggacccaaaatttgtaaagtgttacaatcagaagcagca 4599 Query: 143 tatactttgaccttggaggtgtaacccttcaaagtttcgaaatcagctaaataatcatcc 202 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4600 tatactttgaccttggaggtgtaacccttcaaagtttcgaaatcagctaaataatcatcc 4659 Query: 203 ttttgcttacaagaaccatcgt-gggtcttaacacctaagttgaatgcaagctcaccaac 261 |||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 4660 ttttgcttacaagaaccatcgtggggtcttaacacctaagntgaatgcaagctcaccaac 4719 Query: 262 agcagcaacagttgaagcaccggccaacaaagtggcagaa 301 ||||||||||||| |||||||||||||| |||||||||| Sbjct: 4720 agcagcaacagtttgagcaccggccaacatagtggcagaa 4759 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8569 Number of Sequences: 1807 Number of extensions: 8569 Number of successful extensions: 97 Number of sequences better than 1.0e-20: 1 length of query: 924 length of database: 10,358,551 effective HSP length: 16 effective length of query: 908 effective length of database: 10,329,639 effective search space: 9379312212 effective search space used: 9379312212 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)