BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC6ZC02FM1.SCF screened BAC_end (887 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1548 1308 0.0 >3x_Contig1548 Length = 9830 Score = 1308 bits (660), Expect = 0.0 Identities = 706/716 (98%), Gaps = 4/716 (0%) Strand = Plus / Plus Query: 86 agaaaaagacagaatcatagcaattttgccagtacctactgtcaacatcttcgaatgagg 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 192 agaaaaagacagaatcatagcaattttgccagtacctactgtcaacatcttcgaatgagg 251 Query: 146 gctctatcaaaatatatgcctttgtttataaactcatctgtccaacttttggcattattc 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 252 gctctatcaaaatatatgcctttgtttataaactcatctgtccaacttttggcattattc 311 Query: 206 tggttatgtaaactgaaactcttttcaatatgaaaatggcgtaataaaaatattcataac 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 312 tggttatgtaaactgaaactcttttcaatatgaaaatggcgtaataaaaatattcataac 371 Query: 266 aggtacttgtcatatcgaacaagattgagttttgttcgatgcaacgaagagagtaaggat 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 372 aggtacttgtcatatcgaacaagattgagttttgttcgatgcaacgaagagagtaaggat 431 Query: 326 ctaatggtgtcgaatcatatgccagagagattgttcatagtggatcatgtcagtagaaat 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 432 ctaatggtgtcgaatcatatgccagagagattgttcatagtggatcatgtcagtagaaat 491 Query: 386 tgattgggataatatccgtggggatttaagcgttaatcaaggtgtgaaggactttttaaa 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 492 tgattgggataatatccgtggggatttaagcgttaatcaaggtgtgaaggactttttaaa 551 Query: 446 ctctcggctacaagagtttgaactgcccagttacgtgaataatcttaaggtaactaattt 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 552 ctctcggctacaagagtttgaactgcccagttacgtgaataatcttaaggtaactaattt 611 Query: 506 cgatttaagtactatgcctccaaatgttatattaaaacagatggatgatcctttagatga 565 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 612 cgatttaggtactatgcctccaaatgttatattaaaacagatggatgatcctttagatga 671 Query: 566 gttttattcttatctgttacaagaaggagatatttcaaaagaagctgcgaaggataagaa 625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 672 gttttattcttatctgttacaagaaggagatatttcaaaagaagctgcgaaggataagaa 731 Query: 626 cactgatgtgcaactattagtggaacttgattataaaggtgatatgagcattgaattgtc 685 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 732 cactgatgtgcaactattagtggaacttgattataaaggtgatatgagcattgaattgtc 791 Query: 686 agctgatcttgttcttaattacccgagcccgcagttcatgattttaccagtttagctacg 745 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 792 agctgatcttgttcttaattacccgagcccgcagttcatgattttaccagttaagctacg 851 Query: 746 aattaagtgatttttggcatgcacttgcttatgccctgcttccatttttgaagaaa 801 || ||||||| | ||||||||||| |||||||| |||||| ||| |||||||||| Sbjct: 852 aa-taagtga-tattggcatgcac-tgcttatg-cctgctcgcatatttgaagaaa 903 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6757 Number of Sequences: 1807 Number of extensions: 6757 Number of successful extensions: 38 Number of sequences better than 1.0e-20: 1 length of query: 887 length of database: 10,358,551 effective HSP length: 16 effective length of query: 871 effective length of database: 10,329,639 effective search space: 8997115569 effective search space used: 8997115569 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)