BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC6ZC05FM1.SCF screened BAC_end (882 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1449 1334 0.0 >3x_Contig1449 Length = 7865 Score = 1334 bits (673), Expect = 0.0 Identities = 691/697 (99%) Strand = Plus / Plus Query: 85 tggcgtagagcttgcacttgtagacggtttagcaagtgtaggtggtgcatgtgagtgatg 144 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6743 tggcgtagagcttgcacttgtagacggtttagcaagtgtaggtggtgcatgtgagtgatg 6802 Query: 145 ggcatgttccttcctggcattgttgaaagcatccgcttcttcccctggttcatgtaaaaa 204 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6803 ggcatgttccttcctggcattgttgaaagcatccgcttcttcccctggttcatgtaaaaa 6862 Query: 205 catacagtttggttttggacatggttgtcccctcaaatacgaggagcagtactttgttgt 264 ||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6863 catacagttcggatttggacatggttgtcccctcaaatacgaggagcagtactttgttgt 6922 Query: 265 accatatgctgctttcacttgatgtccatcaatatagataccatctatggcttgaataca 324 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6923 accatatgctgctttcacttgatgtccatcaatatagataccatctatggcttgaataca 6982 Query: 325 ttttgctgcatcgtcttttctggaaaaagtaacgtaaataccgtaacctgaatttatatg 384 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6983 ttttgctgcatcgtcttttctggaaaaagtaacgtaaataccgtaacctgaatttatatg 7042 Query: 385 actcgatgaatttgaaacagaatggtgctcgtgtccagtcttcttattgatgacgatctt 444 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7043 actcgatgaatttgaaacagaatggtgctcgtgtccagtcttcttattgatgacgatctt 7102 Query: 445 gttaatttttccatactggccaaaatacttgtccgatctcaagatggatggaagttcttc 504 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7103 gttaattttttcatactggccaaaatacttgtccgatctcaagatggatggaagttcttc 7162 Query: 505 gtaagggtaaggtggattcaacccaataacgtaaaccaaattcttctgaatgaccctcat 564 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7163 gtaagggtaaggtggattcaacccaataacgtaaaccaaattcttctgaatgaccctcat 7222 Query: 565 accagcaagctgtttcctattatgagtgtcattttctctacgttcacgctccctttgctt 624 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7223 accagcaagctgtttcctattatgagtgtcattttctctacgttcacgctccctttgctt 7282 Query: 625 acgatcacgttcttttctggcctgcttggaacgttccattttcaactcttctggagaaag 684 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7283 acgatcacgttcttttctggcctgcttggaacgttccattttcaactcttctggagaaag 7342 Query: 685 aacgatgtactcgacgctttcattgtcgtactttcgacgacaagccggacatcgaccatt 744 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 7343 aacgatgtactcgacgctttcatcgtcgtactttcgacgacaagccggacatcgaccatt 7402 Query: 745 aagctcaagattttgacgaattttgttataacaaaac 781 ||||||| ||||||||||||| ||||||||||||||| Sbjct: 7403 aagctcaggattttgacgaatattgttataacaaaac 7439 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6123 Number of Sequences: 1807 Number of extensions: 6123 Number of successful extensions: 37 Number of sequences better than 1.0e-20: 1 length of query: 882 length of database: 10,358,551 effective HSP length: 16 effective length of query: 866 effective length of database: 10,329,639 effective search space: 8945467374 effective search space used: 8945467374 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)