BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC6ZC05RM1.SCF screened BAC_end (915 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1666 1219 0.0 >3x_Contig1666 Length = 16162 Score = 1219 bits (615), Expect = 0.0 Identities = 695/710 (97%), Gaps = 10/710 (1%) Strand = Plus / Plus Query: 47 taatttttcaaaattttcagcttgtaagaagaagggacacctgtgcacctcataataaat 106 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7768 taatttttcaaaattttcagcttgtaagaagaagggacacctgtgcacctcataataaat 7827 Query: 107 gtaaaagaagctataacatacataaggcagtctataatttaatcatgctaattattcaga 166 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7828 gtaaaagaagctataacatacataaggcagtctataatttaatcatgctaattattcaga 7887 Query: 167 tgcagtggatccactcaatgagtccatatcctgaccattttatctttcccaccgctacat 226 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7888 tgcagtggatccactcaatgagtccatatcctgaccattttatctttcccaccgctacat 7947 Query: 227 acacgtttaccgtctacagaccaatctacagtgtagacttcatcttgatgaccgggtaga 286 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7948 acacgtttaccgtctacagaccaatctacagtgtagacttcatcttgatgaccgggtaga 8007 Query: 287 tcgacggacagttttctagttttgacatcccagacttttaaagtggtatctttggaacaa 346 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8008 tcgacggacagttttctagttttgacatcccagacttttaaagtggtatctttggaacaa 8067 Query: 347 gaaacgagtagtctacagtcgcttgaccaagctacttggtagacactcgctacatgtcct 406 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8068 gaaacgagtagtctacagtcgcttgaccaagctacttggtagacactcgctacatgtcct 8127 Query: 407 ctaaaggtggataggaatttaccatcccttccatcccataatttaatggagttgtcaaag 466 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8128 ctaaaggtggataggaatttaccatcccttccatcccataatttaatggagttgtcaaag 8187 Query: 467 gatgcagaaacaatgtaacggccatctggcgaaaatgcaacgtggttgacgagcttttgg 526 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8188 gatgcagaaacaatgtaacggccatctggcgaaaatgcaacgtggttgacgagcttttgg 8247 Query: 527 tggccggtcattctggtaataggtttagtagacttcaaggggttccacagatacatagta 586 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8248 tggccggtcattctggtaataggtttagtagacttcaaggggttccacagatacatagta 8307 Query: 587 aaatcgtcactggcagttaccatcagttctttgaagtcacctttttcttttagcaacttt 646 ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| || Sbjct: 8308 aaatcgtcactggcagttaccatcagttcttcgaagtcacc-ttttcttttagcaac-tt 8365 Query: 647 tttcgtaatttttcagagcccttctgttgggcttttttcaggtgaaagcaggagtttcgg 706 |||||||||||||||||| ||||||||||||| || |||||||| |||||||||||||| Sbjct: 8366 tttcgtaatttttcagag-ccttctgttgggc-ttcttcaggtg-aagcaggagtttcg- 8421 Query: 707 ccctttgggatcgaacgcacccgagtctttaatgcattattctgttgaaa 756 || ||| ||||||||||| ||||||| |||||||| || |||||||||| Sbjct: 8422 -cccttgtgatcgaacgca-ccgagtc-ttaatgca-taatctgttgaaa 8467 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6208 Number of Sequences: 1807 Number of extensions: 6208 Number of successful extensions: 51 Number of sequences better than 1.0e-20: 1 length of query: 915 length of database: 10,358,551 effective HSP length: 16 effective length of query: 899 effective length of database: 10,329,639 effective search space: 9286345461 effective search space used: 9286345461 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)