BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC6ZC07FM1.SCF screened BAC_end (957 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1726 856 0.0 >3x_Contig1726 Length = 20144 Score = 856 bits (432), Expect = 0.0 Identities = 492/508 (96%), Gaps = 3/508 (0%) Strand = Plus / Minus Query: 115 tgttgctgttgccatcaaaagagattgtggataatttctgcggccggatcctagtgtgtc 174 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9261 tgttgctgttgccatcaaaagagattgtggataatttctgcggccggatcctagtgtgtc 9202 Query: 175 tggaataacgtcaagcgtcatacatggccaaggaacgttaactgtatgtaacatttcgta 234 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9201 tggaataacgtcaagcgtcatacatggccaaggaacgttaactgtatgtaacatttcgta 9142 Query: 235 gactgtaggatcttcttccaaaacttcatcaggacccaaaggcttagataaatgtggcaa 294 |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9141 gactgtaggatcagcttccaaaacttcatcaggacccaaaggcttagataaatgtggcaa 9082 Query: 295 ccacaattgttcactttgctcttgttcagcattttgatccttttcgactagctcttgagc 354 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9081 ccacaattgttcactttgctcttgttcagcattttgatccttttcgactagctcttgagc 9022 Query: 355 ttgttgatgcttcttttccagaaactcatcgttctcaatgttcccatctaattcttcttc 414 |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 9021 ttgttgttgcttcttttccagaaactcatcgttctcaatgtttccatctaattcttcttc 8962 Query: 415 attatcttcttcatcgccaattccgatgatttcgccatcactctcgaaatcattcaccat 474 |||||||||||||||| ||||| ||||||||||||||||||||||||||||| ||||||| Sbjct: 8961 attatcttcttcatcgtcaatttcgatgatttcgccatcactctcgaaatca-tcaccat 8903 Query: 475 aagggtcctcgaattcacccatttcaacatcttgctcattggcattcactgcattggccg 534 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8902 aagggtcctcgaattcacccatttcaacatcttgctcattggcattcactgcattggccg 8843 Query: 535 acggtacttcaccagcctttggcttagaatggacaatctctatcatcgacgttattctag 594 | |||||||||||||||| || ||||||||||||||| || |||||||||||| |||||| Sbjct: 8842 atggtacttcaccagcctctgtcttagaatggacaat-tcgatcatcgacgtt-ttctag 8785 Query: 595 tcctttataggaagcagatctcttggac 622 ||||| || |||||||| |||||||||| Sbjct: 8784 tccttcatcggaagcagttctcttggac 8757 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8826 Number of Sequences: 1807 Number of extensions: 8826 Number of successful extensions: 56 Number of sequences better than 1.0e-20: 1 length of query: 957 length of database: 10,358,551 effective HSP length: 16 effective length of query: 941 effective length of database: 10,329,639 effective search space: 9720190299 effective search space used: 9720190299 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)