BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC6ZC12RM1.SCF screened BAC_end (1001 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig637 1019 0.0 >3x_Contig637 Length = 2206 Score = 1019 bits (514), Expect = 0.0 Identities = 524/526 (99%), Gaps = 1/526 (0%) Strand = Plus / Minus Query: 75 cttcaacaaatcc-ttttcccattctggaaagctcgtcgactgaattctcccggcatcgc 133 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 540 cttcaacaaatccattttcccattctggaaagctcgtcgactgaattctcccggcatcgc 481 Query: 134 catacgaatatctctttcagagtcccgcaaaccctggattgagtttaacgctgcctttat 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 480 catacgaatatctctttcagagtcccgcaaaccctggattgagtttaacgctgcctttat 421 Query: 194 aatagctttccccccatgtagatgcaattccactaaatcttcacctgtaaaggtccgtgg 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 420 aatagctttccccccatgtagatgcaattccactaaatcttcacctgtaaaggtccgtgg 361 Query: 254 ttgtgggaagtacaagactaacgcttcatctatcagagttgatgccttgggatcatataa 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 360 ttgtgggaagtacaagactaacgcttcatctatcagagttgatgccttgggatcatataa 301 Query: 314 tgaccgaatcatcggtttcctctgccgtagcggtttttttggcgacaatttttttaagat 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 300 tgaccgaatcatcggtttcctctgccgtagcggtttttttggcgacaatttttttaagat 241 Query: 374 atactttgaatgtgtacccgatatcctaattatagctattgcagagtgctgatttgatgg 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 240 atactttgaatgtgtacccgatatcctaattatagctattgcagagtgctgatttgatgg 181 Query: 434 cgttgataatgcatacactgtaggatggaaaaatgtcgctggaacactataaaaccgtcg 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 180 cgttgataatgcatacactgtaggatggaaaaatgtcgctggaacactataaaaccgtcg 121 Query: 494 caacattgggctgaacatcactttttgcgaaaaattgaaccaaatgagagtgggatcctt 553 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 120 caacattgggctgaacatcactttttgcgaaaaattgaacctaatgagagtgggatcctt 61 Query: 554 gtagactaccattacgattccaactgcaatttatggtagtttagaa 599 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 60 gtagactaccattacgattccaactgcaatttatggtagtttagaa 15 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6049 Number of Sequences: 1807 Number of extensions: 6049 Number of successful extensions: 33 Number of sequences better than 1.0e-20: 1 length of query: 1001 length of database: 10,358,551 effective HSP length: 16 effective length of query: 985 effective length of database: 10,329,639 effective search space: 10174694415 effective search space used: 10174694415 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)