BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC6ZD04RM1.SCF screened BAC_end (907 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig816 1366 0.0 >3x_Contig816 Length = 2278 Score = 1366 bits (689), Expect = 0.0 Identities = 715/721 (99%), Gaps = 2/721 (0%) Strand = Plus / Plus Query: 58 ttctggtccaaagggtctccccacaagaccaaggtgaattgactggtatcttggctgaac 117 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1048 ttctggtccaaagg-tctccccacaagaccaaggtgaattgactggtatcttggctgaac 1106 Query: 118 taggttactccaagagtaacgtcttcaagttctgagaagagtgacccttagacttctttt 177 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1107 taggttactccaagagtaacgtcttcaagttctgagaagagtgacccttagacttctttt 1166 Query: 178 acccttctaagcacttttttctgaatcttcaacataaatatattcaattactctttaaaa 237 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1167 acccttctaagcacttttttctgaatcttcaacataaatatattcaattactctttaaaa 1226 Query: 238 ccaatgacgacttgttaagcaacaattaaccagaagaaaaaataaacaaaacacattttc 297 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1227 ccaatgacgacttgttaagcaacaattaaccagaagaaaaaataaacaaaacacattttc 1286 Query: 298 aaataggggtccattgttgtgaatctgggaaagtagcggttgatcgattcaactgcagtc 357 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1287 aaataggggtccattgttgtgaatctgggaaagtagcggttgatcgattcaactgcagtc 1346 Query: 358 ttttccttatttttcctcctgacaaaactttggataaaggcctttcgacagctaagccca 417 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1347 ttttccttatttttcctcctgacaaaactttggataaaggcctttcgacagctaagccca 1406 Query: 418 aattatcatgattttatttacacattatctaaaacaattctttattacacaagtataaca 477 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1407 aattatcatgattttatttacacattatctaaaacaattctttattacacaagtataaca 1466 Query: 478 acatagtttcttatttttcggcaaatggtgataaacatttgatctggtgtttgacatacg 537 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1467 acatagtttcttatttttcggcaaatggtgataaacatttgatctggtgtttgacatacg 1526 Query: 538 ggacgtcacctctttactgtagaaacttttctgttacatattccgtttgttttatgacag 597 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1527 ggacgtcacctctttactgtagaaacttttctgttacatattccgtttgttttatgacag 1586 Query: 598 atctataactttgtggtacgggtattctgtatttcgaccaatcttctacatgtccgactt 657 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1587 atctataactttgtggtacgggtattctgtatttcgaccaatcttctacatgtccgactt 1646 Query: 658 caacgttactttgcaattcgtctacaggaatttgttgcaaattcttgcctttcaatgagt 717 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 1647 caacgttactttgcaattcgtctacaggaatttgttgcaaatccttgcctttcaatgagt 1706 Query: 718 cttttatggaaaagacaagatttcaaatttgctagatattcaggatccccatacaatgcc 777 ||||||||| ||||||| |||||||||||||||||||||||||||||| |||||||||| Sbjct: 1707 cttttatgg-aaagacagtatttcaaatttgctagatattcaggatcccaatacaatgcc 1765 Query: 778 c 778 | Sbjct: 1766 c 1766 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7589 Number of Sequences: 1807 Number of extensions: 7589 Number of successful extensions: 57 Number of sequences better than 1.0e-20: 1 length of query: 907 length of database: 10,358,551 effective HSP length: 16 effective length of query: 891 effective length of database: 10,329,639 effective search space: 9203708349 effective search space used: 9203708349 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)