BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC6ZD06RM1.SCF screened BAC_end (949 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1468 1120 0.0 >3x_Contig1468 Length = 9852 Score = 1120 bits (565), Expect = 0.0 Identities = 584/589 (99%), Gaps = 1/589 (0%) Strand = Plus / Minus Query: 45 cttgagtttgtagccttattgaacgtttcgctaacttcgtttatttcggtaatcaacgag 104 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3081 cttgagtttgtagccttattgaacgtttcgctaacttcgtttatttcggtaatcaacgag 3022 Query: 105 gaaagatttagtgacaaagagtttaggttgtcgtcaagcatttccactgtatgataggct 164 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3021 gaaagatttagtgacaaagagtttaggttgtcgtcaagcatttccactgtatgataggct 2962 Query: 165 tgttgtctcttttgatcattcgttttgcttgtgttgttattgttgctcgaagaaagcacc 224 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2961 tgttgtctcttttgatcattcgttttgcttgtgttgttattgttgctcgaagaaagcacc 2902 Query: 225 tcagatagcagatcttcagccttttgttcataagaatcgaggaaatactcaagttcagat 284 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2901 tcagatagcagatcttcagccttttgttcataagaatcgaggaaatactcaagttcagat 2842 Query: 285 tgttgtctttcgatatatgagagagactgatctactctattttgagattgttcagcagtt 344 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2841 tgttgtctttcgatatatgagagagactgatctactctattttgagattgttcagcagtt 2782 Query: 345 aatgtatcagagtacaaccgacttatttgttcaccaccttgcattaatactttgtcccac 404 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2781 aatgtatcagagtacaaccgacttatttgttcaccaccttgcattaatactttgtcccac 2722 Query: 405 tgatttatcttcttggcgtaactctcaaagtgatctgcggttccagaaagttgggaggtc 464 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2721 tgatttatcttcttggcgtaactctcaaagtgatctgcggttccagaaagttgggaggtc 2662 Query: 465 cattttgatactaagtcatccaaagtcttattgtcgagggaaacaggttcgatagtaacg 524 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2661 cattttgatactaagtcatccaaagtcttattgtcgagggaaacaggttcgatagtaacg 2602 Query: 525 ggtttagtagatgtctttgttccagttgtagtttcctgcttaacactttcagttggttct 584 |||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| Sbjct: 2601 ggtttagtagatgtctttgttccagttgtagtttcctgcttagcactttcagttgtttct 2542 Query: 585 ttggtagtatccggtttcagaccgtccaaagaatagggaaggagcttca 633 |||||||||||||||||||||||| |||||||| | ||||||||||||| Sbjct: 2541 ttggtagtatccggtttcagaccgcccaaagaa-aaggaaggagcttca 2494 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7252 Number of Sequences: 1807 Number of extensions: 7252 Number of successful extensions: 55 Number of sequences better than 1.0e-20: 1 length of query: 949 length of database: 10,358,551 effective HSP length: 16 effective length of query: 933 effective length of database: 10,329,639 effective search space: 9637553187 effective search space used: 9637553187 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)