BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC6ZD09FM1.SCF screened BAC_end (909 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1711 1003 0.0 >3x_Contig1711 Length = 15491 Score = 1003 bits (506), Expect = 0.0 Identities = 545/556 (98%), Gaps = 2/556 (0%) Strand = Plus / Minus Query: 70 aacggtgttttcaccacaagccaaaccttgaagcagaaaaaggtagaaaacctaaaatga 129 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7885 aacggtgttttcaccacaagccaaaccttgaagcagaaaaaggtagaaaacctaaaatga 7826 Query: 130 tccaaaaaaactggagaattagaatgacctgaccagagtaataccaacctttgggtcctc 189 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 7825 tccaaaaaaactggagaattagaaagacctgaccagagtaataccaacctttgggtcctc 7766 Query: 190 tgatgtgcatanatcntttcgacagtaaaggcaaagatatatgttttttttccttccaga 249 ||||||||| | | | |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7765 tgatgtgcaaatagcttttcgacagtaaaggcaaagatatatgttttttttccttccaga 7706 Query: 250 aatattagtcttggttctcttttttaatcgaaagcctttcctttactagtcttacttgca 309 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7705 aatattagtcttggttctcttttttaatcgaaagcctttcctttactagtcttacttgca 7646 Query: 310 tcatgaacgttgcgaggacaagactcataggtgccaaaaaaaaaccaaatacaactggca 369 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7645 tcatgaacgttgcgaggacaagactcataggtgccaaaaaaaaaccaaatacaactggca 7586 Query: 370 cttatataataatgggaaagtttaatgttaccaccagccagaacggaactttggctatgg 429 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7585 cttatataataatgggaaagtttaatgttaccaccagccagaacggaactttggctatgg 7526 Query: 430 ctactcagttcattcagctcagctcttgcagatcttttgatgccacctgcctggtgtttt 489 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7525 ctactcagttcattcagctcagctcttgcagatcttttgatgccacctgcctggtgtttt 7466 Query: 490 ttaagcaacatgggatgaataaggaacacatagtgaactcagtaactaacgagttttcac 549 | ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 7465 tcaagcaacatgggatgaataaggaacacatagtgaactcagtaactaaggagttttcac 7406 Query: 550 cataaccgacggcacgaaaaaaatttctttgtgccgtacgtaaagaacaatgtgtcatac 609 |||||||||||||||| || |||||||||||||||||||||||||| ||||||||||||| Sbjct: 7405 cataaccgacggcacg-aagaaatttctttgtgccgtacgtaaagatcaatgtgtcatac 7347 Query: 610 acctggttcgcttcac 625 | |||||||||||||| Sbjct: 7346 a-ctggttcgcttcac 7332 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6775 Number of Sequences: 1807 Number of extensions: 6775 Number of successful extensions: 53 Number of sequences better than 1.0e-20: 1 length of query: 909 length of database: 10,358,551 effective HSP length: 16 effective length of query: 893 effective length of database: 10,329,639 effective search space: 9224367627 effective search space used: 9224367627 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)