BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC6ZE02RM1.SCF screened BAC_end (894 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1386 987 0.0 >3x_Contig1386 Length = 5452 Score = 987 bits (498), Expect = 0.0 Identities = 527/534 (98%), Gaps = 2/534 (0%) Strand = Plus / Minus Query: 358 atgtgatgaatgtatgaagatattaattaaacggtattttaataaaggaaaaaagggtct 417 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5452 atgtgatgaatgtatgaagatattaattaaacggtattttaataaaggaaaaaagggtct 5393 Query: 418 cgggacaaaaaaaaaaaaaaggaaggtagggaaaataaaggtgagaagaaccgattattc 477 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5392 cgggacaaaaaaaaaaaaaaggaaggtagggaaaataaaggtgagaagaaccgattattc 5333 Query: 478 ggcaggtattaggtggtcattgaatactctctttctctctctcattaatcatcggataac 537 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5332 ggcaggtattaggtggtcattgaatactctctttctctctctcattaatcatcggataac 5273 Query: 538 atgtcgtttttagtacttttttcatttttatttcgactttttctttgacaaaaggtttgt 597 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5272 atgtcgtttttagtacttttttcatttttatttcgactttttctttgacaaaaggtttgt 5213 Query: 598 atcgaagtcagcattgcttaaagttccagtttttaaaggcttttttacgtttaaagttcg 657 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5212 atcgaagtcagcattgcttaaagttccagtttttaaaggcttttttacgtttaaagttcg 5153 Query: 658 attaaaggtaagatttaaattttaattttaagaaactgtcaactaaatgaagacactcaa 717 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5152 attaaaggtaagatttaaattttaattttaagaaactgtcaactaaatgaagacactcaa 5093 Query: 718 ctcttggaagaaaggaagggaaactgtaccagtgaagtagaatagaatatagttttgtgt 777 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 5092 ctcttggaagaaaggaagggaaactgtaccagtgaagtagaatagaatatag-tttgtgt 5034 Query: 778 tgtgggaatttgaaaaaaaaaaaaggagggccgagagaaagagggagagacaatggccaa 837 ||| ||||||||||||||||||||||| || ||||||||||||||||||||||||||||| Sbjct: 5033 tgt-ggaatttgaaaaaaaaaaaaggaagggcgagagaaagagggagagacaatggccaa 4975 Query: 838 ttataatttaacggctttggtgttgaaattatagtaagtagcagcggtaaagta 891 ||||||||||||||||||| ||||| ||| |||||||||||||||||||||||| Sbjct: 4974 ttataatttaacggctttgttgttgtaataatagtaagtagcagcggtaaagta 4921 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 23,241 Number of Sequences: 1807 Number of extensions: 23241 Number of successful extensions: 480 Number of sequences better than 1.0e-20: 1 length of query: 894 length of database: 10,358,551 effective HSP length: 16 effective length of query: 878 effective length of database: 10,329,639 effective search space: 9069423042 effective search space used: 9069423042 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)