BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC6ZE07RM1.SCF screened BAC_end (909 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1356 1243 0.0 >3x_Contig1356 Length = 8043 Score = 1243 bits (627), Expect = 0.0 Identities = 672/682 (98%), Gaps = 4/682 (0%) Strand = Plus / Minus Query: 46 ctttgtccgctcaca-gattgctgaattcttatcctctaacgaaaatgtcatcgcagtta 104 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2475 ctttgtccgctcacaagattgctgaattcttatcctctaacgaaaatgtcatcgcagtta 2416 Query: 105 attacccaggtttaccaactcacgaaagttatgcagtcgttaagaaacaacaccgcgatg 164 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2415 attacccaggtttaccaactcacgaaagttatgcagtcgttaagaaacaacaccgcgatg 2356 Query: 165 ctctaggtggtggtatgatctccttcagaatcaaaggtggtgcagaagctgcttctacct 224 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2355 ctctaggtggtggtatgatctccttcagaatcaaaggtggtgcagaagctgcttctacct 2296 Query: 225 tctcatcttctaccagattattcactctggctgaatctcttggtggtatcgaatccctat 284 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2295 tctcatcttctaccagattattcactctggctgaatctcttggtggtatcgaatccctat 2236 Query: 285 tggaagttcctgccgtcatgacccacggtggtatcccaaaggagcaaagagaagcatccg 344 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2235 tggaagttcctgccgtcatgacccacggtggtatcccaaaggagcaaagagaagcatccg 2176 Query: 345 gtgtttacgacgatttggtcagattatccattggtattgaggatacagatgatctattgg 404 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2175 gtgtttacgacgatttggtcagattatccattggtattgaggatacagatgatctattgg 2116 Query: 405 aagatattaagcaagctcttgcatccgcatccaactaatattaattttcgataaaacacc 464 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2115 aagatattaagcaagctcttgcatccgcatccaactaatattaattttcgataaaacacc 2056 Query: 465 agaaacacccttccacatcaatgaagaaaacgagagcacgttaattaattcatatgcgac 524 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2055 agaaacacccttccacatcaatgaagaaaacgagagcacgttaattaattcatatgcgac 1996 Query: 525 agcattttcaatggcagggttttcaacccccatctatttgctttaataggtccacttctg 584 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1995 agcattttcaatggcagggttttcaacccccatctatttgctttaataggtccacttctg 1936 Query: 585 ttattgtacggattagtatatagaatttttttttatctatctggctatactagctcacgt 644 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1935 ttattgtacggattagtatatagaatttttttttatctatctggctatactagctcacgt 1876 Query: 645 ctntgatagactctttattttatataaccccagaattactgttttgatagaacattcact 704 || |||||||||||||| | |||| | |||||||| |||||||||||||||||||||| Sbjct: 1875 ctttgatagactcttta-tctataataacccagaatcactgttttgatagaacattcac- 1818 Query: 705 ttctcactgacgggcaggtagt 726 ||||||||||| |||||||||| Sbjct: 1817 ttctcactgac-ggcaggtagt 1797 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 14,533 Number of Sequences: 1807 Number of extensions: 14533 Number of successful extensions: 145 Number of sequences better than 1.0e-20: 1 length of query: 909 length of database: 10,358,551 effective HSP length: 16 effective length of query: 893 effective length of database: 10,329,639 effective search space: 9224367627 effective search space used: 9224367627 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)