BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC6ZE08FM1.SCF screened BAC_end
         (910 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1513                                                        1378   0.0  

>3x_Contig1513 
          Length = 11967

 Score = 1378 bits (695), Expect = 0.0
 Identities = 753/766 (98%), Gaps = 6/766 (0%)
 Strand = Plus / Minus

                                                                        
Query: 88   tgtgctcttaacgctgaaatttttcaaaaagaaactagtttagcttcaacaccgtacagt 147
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8521 tgtgctcttaacgctgaaatttttcaaaaagaaactagtttagcttcaacaccgtacagt 8462

                                                                        
Query: 148  atgatcatatcacgtgatatattagatctattgggaaaacgagatttgtttacaattgga 207
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8461 atgatcatatcacgtgatatattagatctattgggaaaacgagatttgtttacaattgga 8402

                                                                        
Query: 208  tcttctcttcacataaacaaactaataaacaaagaggaaaaggaaagtggaagaaacatc 267
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8401 tcttctcttcacataaacaaactaataaacaaagaggaaaaggaaagtggaagaaacatc 8342

                                                                        
Query: 268  ggcggcaacctcatagcagcctttccctggtgtatactcgtggtattattgaccaaaagg 327
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8341 ggcggcaacctcatagcagcctttccctggtgtatactcgtggtattattgaccaaaagg 8282

                                                                        
Query: 328  gtgcaattgtttgatatggatgttcaggatggagaatctcctacaaatcgtcgtgttctg 387
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8281 gtgcaattgtttgatatggatgttcaggatggagaatctcctacaaatcgtcgtgttctg 8222

                                                                        
Query: 388  aattctatagcggaggttttccaggtggcgcagaagagttatgctggtcacagacgtcat 447
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8221 aattctatagcggaggttttccaggtggcgcagaagagttatgctggtcacagacgtcat 8162

                                                                        
Query: 448  gtagctgtcttatacaggatttatttgaaatgtgtggagcaagagatatcagatgtgttt 507
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8161 gtagctgtcttatacaggatttatttgaaatgtgtggagcaagagatatcagatgtgttt 8102

                                                                        
Query: 508  cattattggtttatcaaaatgactgtcaaaatcttgccgctgaagaaacaggaaatcgtg 567
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8101 cattattggtttatcaaaatgactgtcaaaatcttgccgctgaagaaacaggaaatcgtg 8042

                                                                        
Query: 568  ggggatcgcattgttcggttgatttcagggttcatcgcaaatatagagtcgaatcttaac 627
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8041 ggggatcgcattgttcggttgatttcagggttcatcgcaaatatagagtcgaatcttaac 7982

                                                                        
Query: 628  aagatgagaaccgaagatggtaatgagcaaaatgtgaggaatttggaagtacatttcgga 687
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7981 aagatgagaaccgaagatggtaatgagcaaaatgtgaggaatttggaagtacatttcgga 7922

                                                                        
Query: 688  ggatttattgatggatttgtgaggaatctgcttcgaggagtggaattcgaaaataaaaac 747
            ||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||
Sbjct: 7921 ggatttattgatggatttgtgaggaatctgcttcgaggagtggaatcgaaaaataaaaac 7862

                                                                        
Query: 748  gtacgatacagagtaatgcaacttttggccgcaactatgggttattatgggaaaaattga 807
            |||||||||||||||||||||||||||||||||||||| || || ||||||| |||||||
Sbjct: 7861 gtacgatacagagtaatgcaacttttggccgcaactat-ggataatatgggagaaattga 7803

                                                          
Query: 808  tgaaggaattggacgaagttgattattgtggggtttttgaagcata 853
            || |||||||| ||| ||||||||| ||||||  ||||||||||||
Sbjct: 7802 tg-aggaattgtacg-agttgatta-tgtggg--ttttgaagcata 7762


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7102
Number of Sequences: 1807
Number of extensions: 7102
Number of successful extensions: 55
Number of sequences better than 1.0e-20: 1
length of query: 910
length of database: 10,358,551
effective HSP length: 16
effective length of query: 894
effective length of database: 10,329,639
effective search space: 9234697266
effective search space used: 9234697266
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)