BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC6ZE08FM1.SCF screened BAC_end (910 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1513 1378 0.0 >3x_Contig1513 Length = 11967 Score = 1378 bits (695), Expect = 0.0 Identities = 753/766 (98%), Gaps = 6/766 (0%) Strand = Plus / Minus Query: 88 tgtgctcttaacgctgaaatttttcaaaaagaaactagtttagcttcaacaccgtacagt 147 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8521 tgtgctcttaacgctgaaatttttcaaaaagaaactagtttagcttcaacaccgtacagt 8462 Query: 148 atgatcatatcacgtgatatattagatctattgggaaaacgagatttgtttacaattgga 207 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8461 atgatcatatcacgtgatatattagatctattgggaaaacgagatttgtttacaattgga 8402 Query: 208 tcttctcttcacataaacaaactaataaacaaagaggaaaaggaaagtggaagaaacatc 267 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8401 tcttctcttcacataaacaaactaataaacaaagaggaaaaggaaagtggaagaaacatc 8342 Query: 268 ggcggcaacctcatagcagcctttccctggtgtatactcgtggtattattgaccaaaagg 327 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8341 ggcggcaacctcatagcagcctttccctggtgtatactcgtggtattattgaccaaaagg 8282 Query: 328 gtgcaattgtttgatatggatgttcaggatggagaatctcctacaaatcgtcgtgttctg 387 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8281 gtgcaattgtttgatatggatgttcaggatggagaatctcctacaaatcgtcgtgttctg 8222 Query: 388 aattctatagcggaggttttccaggtggcgcagaagagttatgctggtcacagacgtcat 447 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8221 aattctatagcggaggttttccaggtggcgcagaagagttatgctggtcacagacgtcat 8162 Query: 448 gtagctgtcttatacaggatttatttgaaatgtgtggagcaagagatatcagatgtgttt 507 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8161 gtagctgtcttatacaggatttatttgaaatgtgtggagcaagagatatcagatgtgttt 8102 Query: 508 cattattggtttatcaaaatgactgtcaaaatcttgccgctgaagaaacaggaaatcgtg 567 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8101 cattattggtttatcaaaatgactgtcaaaatcttgccgctgaagaaacaggaaatcgtg 8042 Query: 568 ggggatcgcattgttcggttgatttcagggttcatcgcaaatatagagtcgaatcttaac 627 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8041 ggggatcgcattgttcggttgatttcagggttcatcgcaaatatagagtcgaatcttaac 7982 Query: 628 aagatgagaaccgaagatggtaatgagcaaaatgtgaggaatttggaagtacatttcgga 687 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7981 aagatgagaaccgaagatggtaatgagcaaaatgtgaggaatttggaagtacatttcgga 7922 Query: 688 ggatttattgatggatttgtgaggaatctgcttcgaggagtggaattcgaaaataaaaac 747 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 7921 ggatttattgatggatttgtgaggaatctgcttcgaggagtggaatcgaaaaataaaaac 7862 Query: 748 gtacgatacagagtaatgcaacttttggccgcaactatgggttattatgggaaaaattga 807 |||||||||||||||||||||||||||||||||||||| || || ||||||| ||||||| Sbjct: 7861 gtacgatacagagtaatgcaacttttggccgcaactat-ggataatatgggagaaattga 7803 Query: 808 tgaaggaattggacgaagttgattattgtggggtttttgaagcata 853 || |||||||| ||| ||||||||| |||||| |||||||||||| Sbjct: 7802 tg-aggaattgtacg-agttgatta-tgtggg--ttttgaagcata 7762 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7102 Number of Sequences: 1807 Number of extensions: 7102 Number of successful extensions: 55 Number of sequences better than 1.0e-20: 1 length of query: 910 length of database: 10,358,551 effective HSP length: 16 effective length of query: 894 effective length of database: 10,329,639 effective search space: 9234697266 effective search space used: 9234697266 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)