BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC6ZE10FM1.SCF screened BAC_end
         (910 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1529                                                         870   0.0  

>3x_Contig1529 
          Length = 11812

 Score =  870 bits (439), Expect = 0.0
 Identities = 439/439 (100%)
 Strand = Plus / Minus

                                                                       
Query: 75  gtagacagacctccatcagttggcatcaagaacaacgtctgtgttaatctattctcattg 134
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 gtagacagacctccatcagttggcatcaagaacaacgtctgtgttaatctattctcattg 380

                                                                       
Query: 135 ataggtttccttggattatcaaaacatttagtgaataagcactcttctataaaaggttga 194
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 ataggtttccttggattatcaaaacatttagtgaataagcactcttctataaaaggttga 320

                                                                       
Query: 195 atacgatccattttggaagcccgtatatccgttcgcgaagtaacagctttaaaacgcaac 254
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 atacgatccattttggaagcccgtatatccgttcgcgaagtaacagctttaaaacgcaac 260

                                                                       
Query: 255 acttaccgaatactggttgtacccagctttaaaaccggtaagattgttgtcccttcggca 314
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 acttaccgaatactggttgtacccagctttaaaaccggtaagattgttgtcccttcggca 200

                                                                       
Query: 315 gaatgtttctttcaagtttatctcatctcaatttttcaagttttacccgatgagcttccg 374
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 gaatgtttctttcaagtttatctcatctcaatttttcaagttttacccgatgagcttccg 140

                                                                       
Query: 375 atatttgatttacttccatgcacaacgttgtgaagatgaagatataaatttcgttgggct 434
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139 atatttgatttacttccatgcacaacgttgtgaagatgaagatataaatttcgttgggct 80

                                                                       
Query: 435 gaacaatttgtgaggacctctatgggtgagaagcatccatgatcagtaaatgtacgcatc 494
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79  gaacaatttgtgaggacctctatgggtgagaagcatccatgatcagtaaatgtacgcatc 20

                              
Query: 495 gagtagcgacaacgctatt 513
           |||||||||||||||||||
Sbjct: 19  gagtagcgacaacgctatt 1


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7053
Number of Sequences: 1807
Number of extensions: 7053
Number of successful extensions: 43
Number of sequences better than 1.0e-20: 1
length of query: 910
length of database: 10,358,551
effective HSP length: 16
effective length of query: 894
effective length of database: 10,329,639
effective search space: 9234697266
effective search space used: 9234697266
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)