BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC6ZE10FM1.SCF screened BAC_end (910 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1529 870 0.0 >3x_Contig1529 Length = 11812 Score = 870 bits (439), Expect = 0.0 Identities = 439/439 (100%) Strand = Plus / Minus Query: 75 gtagacagacctccatcagttggcatcaagaacaacgtctgtgttaatctattctcattg 134 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 439 gtagacagacctccatcagttggcatcaagaacaacgtctgtgttaatctattctcattg 380 Query: 135 ataggtttccttggattatcaaaacatttagtgaataagcactcttctataaaaggttga 194 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 379 ataggtttccttggattatcaaaacatttagtgaataagcactcttctataaaaggttga 320 Query: 195 atacgatccattttggaagcccgtatatccgttcgcgaagtaacagctttaaaacgcaac 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 319 atacgatccattttggaagcccgtatatccgttcgcgaagtaacagctttaaaacgcaac 260 Query: 255 acttaccgaatactggttgtacccagctttaaaaccggtaagattgttgtcccttcggca 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 259 acttaccgaatactggttgtacccagctttaaaaccggtaagattgttgtcccttcggca 200 Query: 315 gaatgtttctttcaagtttatctcatctcaatttttcaagttttacccgatgagcttccg 374 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 199 gaatgtttctttcaagtttatctcatctcaatttttcaagttttacccgatgagcttccg 140 Query: 375 atatttgatttacttccatgcacaacgttgtgaagatgaagatataaatttcgttgggct 434 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139 atatttgatttacttccatgcacaacgttgtgaagatgaagatataaatttcgttgggct 80 Query: 435 gaacaatttgtgaggacctctatgggtgagaagcatccatgatcagtaaatgtacgcatc 494 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 79 gaacaatttgtgaggacctctatgggtgagaagcatccatgatcagtaaatgtacgcatc 20 Query: 495 gagtagcgacaacgctatt 513 ||||||||||||||||||| Sbjct: 19 gagtagcgacaacgctatt 1 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7053 Number of Sequences: 1807 Number of extensions: 7053 Number of successful extensions: 43 Number of sequences better than 1.0e-20: 1 length of query: 910 length of database: 10,358,551 effective HSP length: 16 effective length of query: 894 effective length of database: 10,329,639 effective search space: 9234697266 effective search space used: 9234697266 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)