BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC6ZG01RM1.SCF screened BAC_end
         (874 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1726                                                        1600   0.0  

>3x_Contig1726 
          Length = 20144

 Score = 1600 bits (807), Expect = 0.0
 Identities = 819/823 (99%)
 Strand = Plus / Minus

                                                                        
Query: 52   tgttgctgttgccatcataagagattgtggataatttctgcggccggatcctagtgtgtc 111
            ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9261 tgttgctgttgccatcaaaagagattgtggataatttctgcggccggatcctagtgtgtc 9202

                                                                        
Query: 112  tggaataacgtcaagcgtcatacatggccaaggaacgttaactgtatgtaacatttcgta 171
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9201 tggaataacgtcaagcgtcatacatggccaaggaacgttaactgtatgtaacatttcgta 9142

                                                                        
Query: 172  gactgtaggatcagcttccaaaacttcatcaggacccaaaggcttagattaatgtggcaa 231
            ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 9141 gactgtaggatcagcttccaaaacttcatcaggacccaaaggcttagataaatgtggcaa 9082

                                                                        
Query: 232  ccacaattgttcactttgctcttgttcagcattttgatccttttcgactagctcttgagc 291
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9081 ccacaattgttcactttgctcttgttcagcattttgatccttttcgactagctcttgagc 9022

                                                                        
Query: 292  ttgttgttgcttcttttccagaaactcatcgttctcaatgtttccatctaattcttcttc 351
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9021 ttgttgttgcttcttttccagaaactcatcgttctcaatgtttccatctaattcttcttc 8962

                                                                        
Query: 352  attatcttcttcatcgtcaatttcgatgatttcgccatcactctcgaaatcatcaccata 411
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8961 attatcttcttcatcgtcaatttcgatgatttcgccatcactctcgaaatcatcaccata 8902

                                                                        
Query: 412  agggtcctcgaattcacccatttcaacatcttgctcattggcattcactgcattggccga 471
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8901 agggtcctcgaattcacccatttcaacatcttgctcattggcattcactgcattggccga 8842

                                                                        
Query: 472  tggtacttcaccagcctctgtcttagaatggacaattcgatcatcgacgttttctagtcc 531
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8841 tggtacttcaccagcctctgtcttagaatggacaattcgatcatcgacgttttctagtcc 8782

                                                                        
Query: 532  ttcatcggaagcagttctcttggacatcctggaattgttctattgaagtacagtttgtca 591
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8781 ttcatcggaagcagttctcttggacatcctggaattgttctattgaagtacagtttgtca 8722

                                                                        
Query: 592  ctgattcaatcaaggccagcaacttttgccaatagatcaatactggtacataacttactt 651
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8721 ctgattcaatcaaggccagcaacttttgccaatagatcaatactggtacataacttactt 8662

                                                                        
Query: 652  atagattccttactatgtagtgtttgatcatctcatcgcatcgtttcaataaaattttca 711
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8661 atagattccttactatgtagtgtttgatcatctcatcgcatcgtttcaataaaattttca 8602

                                                                        
Query: 712  atattggaaaaagaaatcatgtggtcacgtgatacgtaaatatgttcttccatgtgtcag 771
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8601 atattggaaaaagaaatcatgtggtcacgtgatacgtaaatatgttcttccatgtgtcag 8542

                                                                        
Query: 772  ttgtgaaagggatactaaataggcaatgtacctatcaaaggtgggctgcggttggcttat 831
            |||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 8541 ttgtgaaaggtatactaaataggcaatgtacctatcaagggtgggctgcggttggcttat 8482

                                                       
Query: 832  cttaaaaactatttcacaacacctcaatgttttcatactcaaa 874
            |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8481 cttaaaaactatttcacaacacctcaatgttttcatactcaaa 8439


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7662
Number of Sequences: 1807
Number of extensions: 7662
Number of successful extensions: 100
Number of sequences better than 1.0e-20: 1
length of query: 874
length of database: 10,358,551
effective HSP length: 16
effective length of query: 858
effective length of database: 10,329,639
effective search space: 8862830262
effective search space used: 8862830262
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)