BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC6ZG05FM1.SCF screened BAC_end (967 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1592 856 0.0 >3x_Contig1592 Length = 12307 Score = 856 bits (432), Expect = 0.0 Identities = 459/467 (98%), Gaps = 1/467 (0%) Strand = Plus / Minus Query: 89 tgattaatgaggaaccgtcgatgcctctctgtcatgatcctgcagccaatgctggggctt 148 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3133 tgattaatgaggaaccgtcgatgcctctctgtcatgatcctgcagccaatgctggggctt 3074 Query: 149 cggtttccgaaaccgataagctgtcaaatcaagaagaaatagtacaggatattattcctt 208 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3073 cggtttccgaaaccgataagctgtcaaatcaagaagaaatagtacaggatattattcctt 3014 Query: 209 ctaatgactgtaatcntttgaagtgttccgaagtctgggatcgtattactgcacatccac 268 |||||||| |||| | |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3013 ctaatgacggtaaacttttgaagtgttccgaagtctgggatcgtattactgcacatccac 2954 Query: 269 gttactcggacctagatatcgatggtctatgtttggagctacggacaaaggctaaatgtt 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2953 gttactcggacctagatatcgatggtctatgtttggagctacggacaaaggctaaatgtt 2894 Query: 329 cggaaaaaggtgtcgttgtcaatgcggaggatgttcaaaaggctttgatttcgcatatgc 388 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2893 cggaaaaaggtgtcgttgtcaatgcggaggatgttcaaaaggctttgatttcgcatatgc 2834 Query: 389 aatgaataatcatttcacttggtttcgcaccacaatactgttacgttcaaattaacggtt 448 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2833 aatgaataatcatttcacttggtttcgcaccacaatactgttacgttcaaattaacggtt 2774 Query: 449 tcaattcttttaacgagtttccgatgtctttctttttgaagtagaggacatatttttttc 508 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 2773 tcaattcttttaacgagtttccgatgtctttctttttgaagtagaggacatatctttttc 2714 Query: 509 gaatggataattaccaacttcttattcctggaagaaacttaaattac 555 |||||||||||||| |||| || |||||| ||||||||||||||||| Sbjct: 2713 gaatggataattacgaactcctcattcct-gaagaaacttaaattac 2668 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 17,339 Number of Sequences: 1807 Number of extensions: 17339 Number of successful extensions: 2264 Number of sequences better than 1.0e-20: 1 length of query: 967 length of database: 10,358,551 effective HSP length: 16 effective length of query: 951 effective length of database: 10,329,639 effective search space: 9823486689 effective search space used: 9823486689 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)