BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC6ZG06FM1.SCF screened BAC_end (967 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1607 759 0.0 >3x_Contig1607 Length = 10159 Score = 759 bits (383), Expect = 0.0 Identities = 424/435 (97%), Gaps = 2/435 (0%) Strand = Plus / Minus Query: 86 taaaccggtattcagaataataaaggaaacagtaagtaatggcagttatttcagtgcgtg 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6492 taaaccggtattcagaataataaaggaaacagtaagtaatggcagttatttcagtgcgtg 6433 Query: 146 ggcttgatgccgtcgtgtctaaggatgaatcgttgggggaggaagttgtagaggggaata 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6432 ggcttgatgccgtcgtgtctaaggatgaatcgttgggggaggaagttgtagaggggaata 6373 Query: 206 ttgatgcttgttatatat-agtgaggtctcatgagcatgatgacaatgccagttacgatg 264 ||||||||||| | || ||||||||||||||||||||||||||||||||||||||||| Sbjct: 6372 ttgatgcttgtaaggaatcagtgaggtctcatgagcatgatgacaatgccagttacgatg 6313 Query: 265 aaccaccaagcttgactcatccgatggagtcacgtgttgtgaggaaaatggatttatact 324 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6312 aaccaccaagcttgactcatccgatggagtcacgtgttgtgaggaaaatggatttatact 6253 Query: 325 tggttcccttgatgtgtatgctatatttcttgtccaatttggataagtctaacattggta 384 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6252 tggttcccttgatgtgtatgctatatttcttgtccaatttggataagtctaacattggta 6193 Query: 385 acgctgaagtcgctggtctctctgagtcttttaatttaacaggtaaccagtacggtaact 444 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 6192 acgctgaagtcgctggtctctctgagtctttgaatttaacaggtaaccagtacggtaact 6133 Query: 445 gtgtgactgtgttctatgcgacgtatattttctttgattcaattggggctaacttgtttg 504 |||||||||||||||||||||||||||| ||||||||| ||||||| ||||||||| ||| Sbjct: 6132 gtgtgactgtgttctatgcgacgtatatcttctttgatccaattggtgctaacttg-ttg 6074 Query: 505 aaaatttttgggccc 519 |||||| |||||||| Sbjct: 6073 aaaattattgggccc 6059 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 22,048 Number of Sequences: 1807 Number of extensions: 22048 Number of successful extensions: 480 Number of sequences better than 1.0e-20: 1 length of query: 967 length of database: 10,358,551 effective HSP length: 16 effective length of query: 951 effective length of database: 10,329,639 effective search space: 9823486689 effective search space used: 9823486689 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)