BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC6ZG07FM1.SCF screened BAC_end
         (892 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1431                                                        1285   0.0  

>3x_Contig1431 
          Length = 10954

 Score = 1285 bits (648), Expect = 0.0
 Identities = 719/736 (97%), Gaps = 5/736 (0%)
 Strand = Plus / Plus

                                                                        
Query: 86   taactatcgaaaaaactcattacaatgcactttacggacttggaatgtgttgtgtcaaac 145
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3069 taactatcgaaaaaactcattacaatgcactttacggacttggaatgtgttgtgtcaaac 3128

                                                                        
Query: 146  ttggaaagtttgaagaagcactattattcttcgagaaggcaagagccttgaatccggtca 205
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3129 ttggaaagtttgaagaagcactattattcttcgagaaggcaagagccttgaatccggtca 3188

                                                                        
Query: 206  atgtcattttgaattgttgctgcggcgttgcgttagaaagattacagcagccagagagag 265
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3189 atgtcattttgaattgttgctgcggcgttgcgttagaaagattacagcagccagagagag 3248

                                                                        
Query: 266  ctttgaacttctacgaattagcaactgagttacaaccaaactcgtctttagcattgttca 325
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3249 ctttgaacttctacgaattagcaactgagttacaaccaaactcgtctttagcattgttca 3308

                                                                        
Query: 326  agaaatcacaacttctattgaacatgggacagtattcttctgcgctacataattttgaaa 385
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3309 agaaatcacaacttctattgaacatgggacagtattcttctgcgctacataattttgaaa 3368

                                                                        
Query: 386  gattagaatcacttacccctgatgaagctcatgtgcactttttgcttggtaacctgtacc 445
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3369 gattagaatcacttacccctgatgaagctcatgtgcactttttgcttggtaacctgtacc 3428

                                                                        
Query: 446  aaattgtgggtaagaagcaagatgcaatgaatcaatatactattgcaatgaacctagacc 505
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3429 aaattgtgggtaagaagcaagatgcaatgaatcaatatactattgcaatgaacctagacc 3488

                                                                        
Query: 506  ctaaaggtagtcaattaataaaagaagccatggaaaaatgtcatgaacagggttgataaa 565
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3489 ctaaaggtagtcaattaataaaagaagccatggaaaaatgtcatgaacagggttgataaa 3548

                                                                        
Query: 566  tctgttatatatcgttacaaaaaatctacttgaaccttcaaccaaattctttcacacaac 625
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3549 tctgttatatatcgttacaaaaaatctacttgaaccttcaaccaaattctttcacacaac 3608

                                                                        
Query: 626  gtgtttttacagttatctatatagccttc-aaaatagcgtctcccattgtatatgagtgt 684
            ||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||
Sbjct: 3609 gtgtttttacagttatctatatagccttcaaaaatagcgtctcccagtgtatatgagtgt 3668

                                                                        
Query: 685  tctcagatgatttgaagattataatattaatgattataatacagatggacgaaggactta 744
            |||||||||||||||||||||||||||||||||| ||||||||||| |||||||||| ||
Sbjct: 3669 tctcagatgatttgaagattataatattaatgataataatacagatagacgaaggac-ta 3727

                                                                        
Query: 745  tagatctacctaaaaaattcttcacagttcgacggattttctttggaaaaattatcgggg 804
             |||||||| |||||||| || ||||| ||||| || ||||||||| | ||| ||| | |
Sbjct: 3728 aagatctacataaaaaatactacacag-tcgac-gaatttctttgg-agaatgatcagtg 3784

                            
Query: 805  aagatcaaatacgatt 820
            ||||||||||||||||
Sbjct: 3785 aagatcaaatacgatt 3800


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7096
Number of Sequences: 1807
Number of extensions: 7096
Number of successful extensions: 52
Number of sequences better than 1.0e-20: 1
length of query: 892
length of database: 10,358,551
effective HSP length: 16
effective length of query: 876
effective length of database: 10,329,639
effective search space: 9048763764
effective search space used: 9048763764
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)