BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC6ZG07RM1.SCF screened BAC_end (877 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1645 1530 0.0 >3x_Contig1645 Length = 12736 Score = 1530 bits (772), Expect = 0.0 Identities = 822/832 (98%), Gaps = 5/832 (0%) Strand = Plus / Minus Query: 48 gtagcattttcggattgagtttggattctcatttcaaatgttctcaaagatctcaataac 107 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7846 gtagcattttcggattgagtttggattctcatttcaaatgttctcaaagatctcaataac 7787 Query: 108 aggaaggcctccaaattagcaatatttgtacccaaatagattctatcagttctcaatttt 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7786 aggaaggcctccaaattagcaatatttgtacccaaatagattctatcagttctcaatttt 7727 Query: 168 gaagcaacttctttatccttgacggcgagaacaccggctaaaagatcagagtgaccaccg 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7726 gaagcaacttctttatccttgacggcgagaacaccggctaaaagatcagagtgaccaccg 7667 Query: 228 aagtatttagtcgcagaatgtagaattacatcaactccgaaatcccaaggattttgcaac 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7666 aagtatttagtcgcagaatgtagaattacatcaactccgaaatcccaaggattttgcaac 7607 Query: 288 ggaggtggtgcaaaagtggaatcaatcaccaagatggcacctttactatgtgtagcatca 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7606 ggaggtggtgcaaaagtggaatcaatcaccaagatggcacctttactatgtgtagcatca 7547 Query: 348 gcgaaagctttgatatcgaatgaggtcccgtacgggttaactggagtctctatgtgaacc 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7546 gcgaaagctttgatatcgaatgaggtcccgtacgggttaactggagtctctatgtgaacc 7487 Query: 408 acatcgcctttacccgcatgttgcaaaatttcatcaatttccaacttgtgttgctccaaa 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7486 acatcgcctttacccgcatgttgcaaaatttcatcaatttccaacttgtgttgctccaaa 7427 Query: 468 ttccaattcctagtgtgaatatcagcaatactacggcacccatgatacccttcaccgata 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7426 ttccaattcctagtgtgaatatcagcaatactacggcacccatgatacccttcaccgata 7367 Query: 528 aaaagtctctttgggttataatacgttagcatagcaaagtatgcagccaaaccgttggca 587 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7366 aaaagtctctttgggttataatacgttagcatagcaaagtatgcagccaaaccgttggca 7307 Query: 588 tacaccacggcttcaccttccaaaaccttcgaaaggacagattccaccctaagggagttt 647 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7306 tacaccacggcttcaccttccaaaaccttcgaaaggacagattccaccctaagggagttt 7247 Query: 648 ggatgagccaatctggaatatataggcttcttttccaagacactgaaatcttctcgctca 707 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7246 ggatgagccaatctggaatatataggcttcttttccaagacactgaaatcttctcgctca 7187 Query: 708 ttccatggaatcaaatcaacttcttcgtacctgaacgtggtagcgacattgattggagaa 767 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7186 ttccatggaatcaaatcaacttcttcgtacctgaacgtggtagcgacattgattggagaa 7127 Query: 768 act-tgtcagtgactctgttgtgcttgtcatctgcgtggactaactctgttgattacgac 826 ||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 7126 actatgtcagtgactctgttgtgcttgtcatctgcgtggactaactctgttgataacgac 7067 Query: 827 cttttatttagaatag-aattc-agttttacggctttgattaaatattactg 876 || || | || |||| ||||| ||||||||||| ||||||||||||||||| Sbjct: 7066 attataataag-atagaaattcaagttttacggc-ttgattaaatattactg 7017 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6170 Number of Sequences: 1807 Number of extensions: 6170 Number of successful extensions: 44 Number of sequences better than 1.0e-20: 1 length of query: 877 length of database: 10,358,551 effective HSP length: 16 effective length of query: 861 effective length of database: 10,329,639 effective search space: 8893819179 effective search space used: 8893819179 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)