BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC6ZG10RM1.SCF screened BAC_end (908 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig792 906 0.0 >3x_Contig792 Length = 2203 Score = 906 bits (457), Expect = 0.0 Identities = 491/501 (98%), Gaps = 1/501 (0%) Strand = Plus / Plus Query: 176 cgtatcttgttttgatcttcaatgcagtttccgttattgcacagacgatctcaaaagtta 235 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 cgtatcttgttttgatcttcaatgcagtttccgttattgcacagacgatctcaaaagtta 60 Query: 236 agaacccaagaatatcgattacatcatcgtgaggtttactgtctatcaactgagatattc 295 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 agaacccaagaatatcgattacatcatcgtgaggtttactgtctatcaactgagatattc 120 Query: 296 cagaccaatctttgaatctttttgattttctgaaagtgaaactggcttgtcgacaatcag 355 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 cagaccaatctttgaatctttttgattttctgaaagtgaaactggcttgtcgacaatcag 180 Query: 356 accaatgcacgtattcttccttcgtcatacctctagtcctatcatcagccatttttagtc 415 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 accaatgcacgtattcttccttcgtcatacctctagtcctatcatcagccatttttagtc 240 Query: 416 tcttcaatgtagccatattagcctcccgttcatcatcgtccatatcatcctcatctggat 475 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 tcttcaatgtagccatattagcctcccgttcatcatcgtccatatcatcctcatctggat 300 Query: 476 tctcaagaggttgctcattgaacatgaactgtaactcccatggtagcttgatgcttgact 535 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tctcaagaggttgctcattgaacatgaactgtaactcccatggtagcttgatgcttgact 360 Query: 536 tcttcacttttatgttgactcccgcttcgtctttgtcctttttgccagcatcttcatcat 595 |||||||||| ||||||||||| ||| ||||||||||||||||||||||||| ||||||| Sbjct: 361 tcttcactttcatgttgactccggctccgtctttgtcctttttgccagcatcatcatcat 420 Query: 596 cattaccgccaggaccagagccatttcctgcaccaccaccttgctgcagcttgctgggca 655 || ||||||||||||||||||||| ||||||||||||||| ||||||||||||||| ||| Sbjct: 421 caataccgccaggaccagagccatctcctgcaccaccacc-tgctgcagcttgctgtgca 479 Query: 656 ttttgatctttggcttttttt 676 | |||||||||||| |||||| Sbjct: 480 tcttgatctttggcatttttt 500 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 9312 Number of Sequences: 1807 Number of extensions: 9312 Number of successful extensions: 71 Number of sequences better than 1.0e-20: 1 length of query: 908 length of database: 10,358,551 effective HSP length: 16 effective length of query: 892 effective length of database: 10,329,639 effective search space: 9214037988 effective search space used: 9214037988 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)