BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC6ZG12FM1.SCF screened BAC_end (924 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1506 1203 0.0 >3x_Contig1506 Length = 7652 Score = 1203 bits (607), Expect = 0.0 Identities = 664/678 (97%), Gaps = 4/678 (0%) Strand = Plus / Plus Query: 97 aaacgtgaaataaagaagttgcagaaacatagagaacagatcaagaattggttgagcaaa 156 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aaacgtgaaataaagaagttgcagaaacatagagaacagatcaagaattggttgagcaaa 60 Query: 157 gatgatatcaaggatagagcagatgtgttgatggagaaccgtagactcattgagagcggt 216 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 gatgatatcaaggatagagcagatgtgttgatggagaaccgtagactcattgagagcggt 120 Query: 217 tttgttaggttcaagtcgatagagaagattatgaagacgaaaaagttctcgactgaagcg 276 | | |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 atggaaaggttcaagtcgatagagaagattatgaagacgaaaaagttctcgactgaagcg 180 Query: 277 ttgacaaatccagatttgattaaagatcctcgagagctcaaaaagagagaccaatttttg 336 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ttgacaaatccagatttgattaaagatcctcgagagctcaaaaagagagaccaatttttg 240 Query: 337 ttcgtcgaggagtgtctcgaagagcttcagaaacagctagatactttcgaggtggaaaac 396 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 241 ttcgtcgaggagtgtctcgaaga-cttcagaaacagctagatactttcgaggtggaaaac 299 Query: 397 aatgaagaacaaatagagaaacatactttccatatctcaaatttggagaatattctaaaa 456 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 300 aatgaagaacaaatagagaaacatactttccatatctcaaatttggagaatattctaaaa 359 Query: 457 ctgttacaaaatgacgatttggaccctgaaacggttcaagaatttcaagaagacatcaga 516 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 360 ctgttacaaaatgacgatttggaccctgaaacggttcaagaatttcaagaagacatcaga 419 Query: 517 tattacgttgacaacaatgatgatccggactttgtagattacgacaccatataccangat 576 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 420 tattacgttgacaacaatgatgatccggactttgtagattacgacaccatataccaggat 479 Query: 577 atgggctgcgaaatccagcctgaagatcttttgaaagaacagagcacaccaagtaaacca 636 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 480 atgggctgcgaaatccagcctgaagatcttttgaaagaacagagcacaccaagtaaacca 539 Query: 637 aagagaagcgaacgttcgccaaggaaaaaggcttctcctgctccattaagccttaaatca 696 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 540 aagagaagcgaacgttcgccaaggaaaaaggcttctcctgctccattaagcctcaaatca 599 Query: 697 aagacttcctctcttgat-ttaccgccacatcgattgctagtgcagct-taccattacat 754 ||||||||||||| |||| ||||||||||||||||||||||||||||| ||||| |||| Sbjct: 600 aagacttcctctcctgatattaccgccacatcgattgctagtgcagctcaaccatcacat 659 Query: 755 gaaaaatgggcaagaacc 772 | | |||||||||||||| Sbjct: 660 g-agaatgggcaagaacc 676 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7109 Number of Sequences: 1807 Number of extensions: 7109 Number of successful extensions: 54 Number of sequences better than 1.0e-20: 1 length of query: 924 length of database: 10,358,551 effective HSP length: 16 effective length of query: 908 effective length of database: 10,329,639 effective search space: 9379312212 effective search space used: 9379312212 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)