BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC6ZG12FM1.SCF screened BAC_end
         (924 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1506                                                        1203   0.0  

>3x_Contig1506 
          Length = 7652

 Score = 1203 bits (607), Expect = 0.0
 Identities = 664/678 (97%), Gaps = 4/678 (0%)
 Strand = Plus / Plus

                                                                       
Query: 97  aaacgtgaaataaagaagttgcagaaacatagagaacagatcaagaattggttgagcaaa 156
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   aaacgtgaaataaagaagttgcagaaacatagagaacagatcaagaattggttgagcaaa 60

                                                                       
Query: 157 gatgatatcaaggatagagcagatgtgttgatggagaaccgtagactcattgagagcggt 216
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  gatgatatcaaggatagagcagatgtgttgatggagaaccgtagactcattgagagcggt 120

                                                                       
Query: 217 tttgttaggttcaagtcgatagagaagattatgaagacgaaaaagttctcgactgaagcg 276
            | |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atggaaaggttcaagtcgatagagaagattatgaagacgaaaaagttctcgactgaagcg 180

                                                                       
Query: 277 ttgacaaatccagatttgattaaagatcctcgagagctcaaaaagagagaccaatttttg 336
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttgacaaatccagatttgattaaagatcctcgagagctcaaaaagagagaccaatttttg 240

                                                                       
Query: 337 ttcgtcgaggagtgtctcgaagagcttcagaaacagctagatactttcgaggtggaaaac 396
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttcgtcgaggagtgtctcgaaga-cttcagaaacagctagatactttcgaggtggaaaac 299

                                                                       
Query: 397 aatgaagaacaaatagagaaacatactttccatatctcaaatttggagaatattctaaaa 456
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 aatgaagaacaaatagagaaacatactttccatatctcaaatttggagaatattctaaaa 359

                                                                       
Query: 457 ctgttacaaaatgacgatttggaccctgaaacggttcaagaatttcaagaagacatcaga 516
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 ctgttacaaaatgacgatttggaccctgaaacggttcaagaatttcaagaagacatcaga 419

                                                                       
Query: 517 tattacgttgacaacaatgatgatccggactttgtagattacgacaccatataccangat 576
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 420 tattacgttgacaacaatgatgatccggactttgtagattacgacaccatataccaggat 479

                                                                       
Query: 577 atgggctgcgaaatccagcctgaagatcttttgaaagaacagagcacaccaagtaaacca 636
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 atgggctgcgaaatccagcctgaagatcttttgaaagaacagagcacaccaagtaaacca 539

                                                                       
Query: 637 aagagaagcgaacgttcgccaaggaaaaaggcttctcctgctccattaagccttaaatca 696
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 540 aagagaagcgaacgttcgccaaggaaaaaggcttctcctgctccattaagcctcaaatca 599

                                                                       
Query: 697 aagacttcctctcttgat-ttaccgccacatcgattgctagtgcagct-taccattacat 754
           ||||||||||||| |||| |||||||||||||||||||||||||||||  ||||| ||||
Sbjct: 600 aagacttcctctcctgatattaccgccacatcgattgctagtgcagctcaaccatcacat 659

                             
Query: 755 gaaaaatgggcaagaacc 772
           | | ||||||||||||||
Sbjct: 660 g-agaatgggcaagaacc 676


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7109
Number of Sequences: 1807
Number of extensions: 7109
Number of successful extensions: 54
Number of sequences better than 1.0e-20: 1
length of query: 924
length of database: 10,358,551
effective HSP length: 16
effective length of query: 908
effective length of database: 10,329,639
effective search space: 9379312212
effective search space used: 9379312212
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)