BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC6ZH01FM1.SCF screened BAC_end (869 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1360 1269 0.0 >3x_Contig1360 Length = 8285 Score = 1269 bits (640), Expect = 0.0 Identities = 705/723 (97%), Gaps = 3/723 (0%) Strand = Plus / Minus Query: 89 ttccttgactgaaaagattaaggttaagatagtttaaacattacaagatgacttcagaaa 148 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3968 ttccttgactgaaaagattaaggttaagatagtttaaacattacaagatgacttcagaaa 3909 Query: 149 taaaagaaaaagaacaatttgaaatcggcgtcgttggtgacactgagactggatccatcg 208 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3908 taaaagaaaaagaacaatttgaaatcggcgtcgttggtgacactgagactggatccatcg 3849 Query: 209 aggtttatgatggataaatcaaaaacgttaaatcacaacaattggaaggtactga-gcat 267 |||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 3848 aggtttatgatggagaaatcaaaaacgttaaatcacaacaattggaaggtactgaagcat 3789 Query: 268 gctgttggccttgatctcttccaagaagttttggacagtgacttgaaatacgatgacaaa 327 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3788 gctgttggccttgatctcttccaagaagttttggacagtgacttgaaatacgatgacaaa 3729 Query: 328 gagtactccaaaatcagacgtaagattgatacctggttattaccagtgctttgtatcaca 387 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3728 gagtactccaaaatcagacgtaagattgatacctggttattaccagtgctttgtatcaca 3669 Query: 388 tacatgcttcagttcttggataagttatcgttgaattatgcttctgcatattccatgaag 447 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3668 tacatgcttcagttcttggataagttatcgttgaattatgcttctgcatattccatgaag 3609 Query: 448 gaggatcttggtcttgttgggaatgagtacggtaatattgccgctatcttcaatgtcggg 507 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3608 gaggatcttggtcttgttgggaatgagtacggtaatattgccgctatcttcaatgtcggg 3549 Query: 508 tatttgatcggttccattccagcaaactacgttattcaaaaacttccagtggccaaatac 567 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3548 tatttgatcggttccattccagcaaactacgttattcaaaaacttccagtggccaaatac 3489 Query: 568 acaggtgtcgccttattcgtttgggcaattttgttgattggacatattggagctacgaac 627 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3488 acaggtgtcgccttattcgtttgggcaattttgttgattggacatattggagctacgaac 3429 Query: 628 tactcatcaatgatggcattgagattcttattangattgatggaagcattaatctctcca 687 ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| Sbjct: 3428 tactcatcaatgatggcattgagattcttattaggattgatggaagcatcaatctctcca 3369 Query: 688 tccaatatgatgatgtgtgccatgttttacaccagaaga-aaccacccttcaggatgtgt 746 ||||||||||||||||||||||||||||||| || ||| ||| ||| ||||| |||||| Sbjct: 3368 tccaatatgatgatgtgtgccatgttttacaacaagagagaacaaccattcagaatgtgt 3309 Query: 747 acatttttgtctatgaatggggtaacgacaatgggtggtggccctttgggcctacgggtt 806 |||||||||||||||||||| ||| ||||||||| |||| || || | |||||||||||| Sbjct: 3308 acatttttgtctatgaatggtgtagcgacaatggttggt-gcgctattggcctacgggtt 3250 Query: 807 ggg 809 ||| Sbjct: 3249 ggg 3247 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6693 Number of Sequences: 1807 Number of extensions: 6693 Number of successful extensions: 56 Number of sequences better than 1.0e-20: 1 length of query: 869 length of database: 10,358,551 effective HSP length: 16 effective length of query: 853 effective length of database: 10,329,639 effective search space: 8811182067 effective search space used: 8811182067 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)