BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC6ZH02FM1.SCF screened BAC_end (960 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1173 846 0.0 >3x_Contig1173 Length = 7454 Score = 846 bits (427), Expect = 0.0 Identities = 452/459 (98%), Gaps = 1/459 (0%) Strand = Plus / Minus Query: 88 gaatgccagtaaaactaccacaattacaacatactatcttgcaatcgtgcagaatcaatg 147 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3937 gaatgccagtaaaactaccacaattacaacatactatcttgcaatcgtgcagaatcaatg 3878 Query: 148 tcacaattttttgaatataaagacactataaaagagggtgatttggtgcttgcatggttg 207 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3877 tcacaattttttgaatataaagacactataaaagagggtgatttggtgcttgcatggttg 3818 Query: 208 tccagggacaatttgaagccaatcaccgtgaaagctggcgaggttttcaacactcgttat 267 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3817 tccagggacaatttgaagccaatcaccgtgaaagctggcgaggttttcaacactcgttat 3758 Query: 268 ggtgctttctcacattcagatatgattggaaaaccatttggttctcaaattgctattaga 327 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3757 ggtgctttctcacattcagatatgattggaaaaccatttggttctcaaattgctattaga 3698 Query: 328 acgaagggaagtaatagatttggtttcattcacgttctgcagccgaccccggaactatgg 387 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3697 acgaagggaagtaatagatttggtttcattcacgttctgcagccgaccccggaactatgg 3638 Query: 388 tctatctctttacctcacagaacccagattgtttatacaccagattccttctatatcatg 447 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 3637 tctatctctttacctcacagaacccagattgtttatacaccagattcctcctatatcatg 3578 Query: 448 cagcggatggagtgcaatcctagatctatggtcattgaagcatgtacggggtcaggttcc 507 |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| | Sbjct: 3577 cagcggatggagtgcaatcctagatctagggtcattgaagcaggtacggggtcaggtt-c 3519 Query: 508 cttttctaatgcgtttgccaaatctgcaagtcatttatt 546 ||||||| |||||||||||| ||||||| |||||||||| Sbjct: 3518 cttttctcatgcgtttgccagatctgcaggtcatttatt 3480 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6321 Number of Sequences: 1807 Number of extensions: 6321 Number of successful extensions: 48 Number of sequences better than 1.0e-20: 1 length of query: 960 length of database: 10,358,551 effective HSP length: 16 effective length of query: 944 effective length of database: 10,329,639 effective search space: 9751179216 effective search space used: 9751179216 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)