BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC6ZH04RM1.SCF screened BAC_end (860 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1610 1441 0.0 >3x_Contig1610 Length = 13981 Score = 1441 bits (727), Expect = 0.0 Identities = 753/759 (99%), Gaps = 2/759 (0%) Strand = Plus / Plus Query: 45 ggtcagacaatgaatataatgctagagcatctgtattttctgctttgactactttagtag 104 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5209 ggtcagacaatgaatataatgctagagcatctgtattttctgctttgactactttagtag 5268 Query: 105 agttcgctaatgaccaagtcggggaaactactacctcaatttccacttttgttttggata 164 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5269 agttcgctaatgaccaagtcggggaaactactacctcaatttccacttttgttttggata 5328 Query: 165 aacttggacaaacaatgcaagtggatgaagctcaattaacagctgaagatagacaaaact 224 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5329 aacttggacaaacaatgcaagtggatgaagctcaattaacagctgaagatagacaaaact 5388 Query: 225 tacatgaattacaatcgaacattttatctgttttggctgcagtgattagaaagaacccac 284 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5389 tacatgaattacaatcgaacattttatctgttttggctgcagtgattagaaagaacccac 5448 Query: 285 aatctgttaatccagtagcagatatgttgatggatctatttatgaaacttttgagcaaga 344 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5449 aatctgttaatccagtagcagatatgttgatggatctatttatgaaacttttgagcaaga 5508 Query: 345 atgatacaacatacgtggaagatgatgtcttttacgctatttctgctctagcatctgcgt 404 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5509 atgatacaacatacgtggaagatgatgtcttttacgctatttctgctctagcatctgcgt 5568 Query: 405 tgggtaaaaactttgaaaagtatttggaaagtttctccccatatttggttaatgcgttaa 464 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5569 tgggtaaaaactttgaaaagtatttggaaagtttctccccatatttggttaatgcgttaa 5628 Query: 465 atcaagtacagtcccaagtttctatcactgccgtcaatctaattgctgatatctctaact 524 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5629 atcaagtacagtcccaagtttctatcactgccgtcaatctaattgctgatatctctaact 5688 Query: 525 ctttagaggatgacttcaagaaattcgctccatcgttcatgagtgttcttgggcaaatgc 584 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5689 ctttagaggatgacttcaagaaattcgctccatcgttcatgagtgttcttgggcaaatgc 5748 Query: 585 tttcttctccagatgcgaagaacgaattacaacctgcagtcctttctgtttttggtgata 644 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 5749 tttcttctccagatgcgaagaaggaattacaacctgcagtcctttctgtttttggtgata 5808 Query: 645 ttgccaccaacattggatcagattttatacagtatttgtcccaagttatgtccgtgtgcg 704 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5809 ttgccaccaacattggatcagattttatacagtatttgtcccaagttatgtccgtgtgcg 5868 Query: 705 tcatggctcaaaactataaaccgaattatagctcttttgatgccctcgattatcaatata 764 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 5869 tcatggctcaaaactataaaccgaattatagctcttctgatgccctcgattatcaatata 5928 Query: 765 aatttattcgaatcaatatttggacgcatacgttggaat 803 || |||| |||||||||| |||||||||||||| ||||| Sbjct: 5929 aa-ttatacgaatcaata-ttggacgcatacgtaggaat 5965 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6656 Number of Sequences: 1807 Number of extensions: 6656 Number of successful extensions: 45 Number of sequences better than 1.0e-20: 1 length of query: 860 length of database: 10,358,551 effective HSP length: 16 effective length of query: 844 effective length of database: 10,329,639 effective search space: 8718215316 effective search space used: 8718215316 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)