BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC6ZH06FM1.SCF screened BAC_end (988 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1726 702 0.0 >3x_Contig1726 Length = 20144 Score = 702 bits (354), Expect = 0.0 Identities = 382/390 (97%), Gaps = 1/390 (0%) Strand = Plus / Minus Query: 115 tgttgctgttgccatcaaaagagattgtggataatttctgcggccggatcctagtgtgtc 174 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9261 tgttgctgttgccatcaaaagagattgtggataatttctgcggccggatcctagtgtgtc 9202 Query: 175 tggaataacgtcaagcgtcatacatggccaaggaacgttaactgtatgtaacatttcgta 234 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9201 tggaataacgtcaagcgtcatacatggccaaggaacgttaactgtatgtaacatttcgta 9142 Query: 235 gactgtaggatcatcttccaaaacttcatcatgacccaaaggcttagataaatgtggcaa 294 ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 9141 gactgtaggatcagcttccaaaacttcatcaggacccaaaggcttagataaatgtggcaa 9082 Query: 295 ccacaattgttcactttgctcttgttcagcattttgatccttttcgactagctcttgagc 354 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9081 ccacaattgttcactttgctcttgttcagcattttgatccttttcgactagctcttgagc 9022 Query: 355 ttgtttgtgcttcttttccagaaactcatcgttctcaatgtttccatctaattctttttc 414 ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 9021 ttgttgttgcttcttttccagaaactcatcgttctcaatgtttccatctaattcttcttc 8962 Query: 415 attatcttcttcatcgtcaatttctatgatttcgccatcactctcgaaatcatcaccata 474 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 8961 attatcttcttcatcgtcaatttcgatgatttcgccatcactctcgaaatcatcaccata 8902 Query: 475 agggtccctcgaattcactcatttcaacat 504 ||||| |||||||||||| ||||||||||| Sbjct: 8901 agggt-cctcgaattcacccatttcaacat 8873 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 18,075 Number of Sequences: 1807 Number of extensions: 18075 Number of successful extensions: 737 Number of sequences better than 1.0e-20: 1 length of query: 988 length of database: 10,358,551 effective HSP length: 16 effective length of query: 972 effective length of database: 10,329,639 effective search space: 10040409108 effective search space used: 10040409108 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)