BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC6ZH08FM1.SCF screened BAC_end (921 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1603 890 0.0 >3x_Contig1603 Length = 12146 Score = 890 bits (449), Expect = 0.0 Identities = 555/584 (95%), Gaps = 6/584 (1%) Strand = Plus / Plus Query: 89 gcagtggcatcatttcttggttcaatggaaattcctatgattaactgcgaaatattgtga 148 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 199 gcagtggcatcatttcttggttcaatggaaattcctatgattaactgcgaaatattgtga 258 Query: 149 tttgcgttggcaccattgaggtcatctgtcattacatcgtcttccatatcaatttcacct 208 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 259 tttgcgttggcaccattgaggtcatctgtcattacatcgtcttccatatcaatttcacct 318 Query: 209 aatccatctgaagggttagctgtcacaccattcccaacattggcctgtggaagttttacc 268 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 319 aatccatctgaagggttagctgtcacaccattcccaacattggcctgtggaagttttacc 378 Query: 269 ttaaaaattgcactcggtttctcattacccaagtatccaaataatttgaagtcctccgct 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 379 ttaaaaattgcactcggtttctcattacccaagtatccaaataatttgaagtcctccgct 438 Query: 329 ggatttagtttaaaatacactgtcgcaaggaattcctgagggaatgttacgtttggtagt 388 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 439 ggatttagtttaaaatacactgtcgcaaggaattcctgagggaatgttacgtttggtagt 498 Query: 389 ataaacaaagtgatatgtgagtatgattttggctttgttgatgataatactattgtatgc 448 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 499 ataaacaaagtgatatgtgagtatgattttggctttgttgatgataatactattgtatgc 558 Query: 449 tgcaaaccattagaattaggttctttagtggataattgtaaggggttcccggaggcgatg 508 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 559 tgcaaaccattagaattaggtacttcagtggataattgtaaggggttcccggaggcgatg 618 Query: 509 gcagcaaacattttacaatttctgtttgctgtacttttgtcagagcgtgagttatttgga 568 |||||||||||||||||||| ||||||||||||| |||||||||| |||||| | ||| Sbjct: 619 gcagcaaacattttacaattcctgtttgctgtac-tttgtcagagtgtgagtagatagga 677 Query: 569 gttccattttttttgtaaccaaaaacccttcttacaaaggtggggtggggttttccccac 628 || ||||||| || | | || ||| || || ||||||||| | || | |||||||| || Sbjct: 678 gtaccattttcttgg--aacagaaagccgtcctacaaaggttgtgt-gtgttttcccaac 734 Query: 629 ttcttttattgagtgtatctctttatataacttgaactttatat 672 |||||||| || |||||| |||||||| ||||||||||||||| Sbjct: 735 ttctttta-tgtatgtatc-ctttatattacttgaactttatat 776 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 9541 Number of Sequences: 1807 Number of extensions: 9541 Number of successful extensions: 84 Number of sequences better than 1.0e-20: 1 length of query: 921 length of database: 10,358,551 effective HSP length: 16 effective length of query: 905 effective length of database: 10,329,639 effective search space: 9348323295 effective search space used: 9348323295 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)