BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC6ZH09FM1.SCF screened BAC_end (1146 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1785 373 e-103 >3x_Contig1785 Length = 37935 Score = 373 bits (188), Expect = e-103 Identities = 210/216 (97%), Gaps = 1/216 (0%) Strand = Plus / Plus Query: 376 agaagctccttctctaccaactaggagaaatgttccacccccaccggaaagtgacgagga 435 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 agaagctccttctctaccaactaggagaaatgttccacccccaccggaaagtgacgagga 60 Query: 436 cgaagaagatgatgatgaaagagcattctctaagtcccaaaatactcctccatctccagc 495 ||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 61 cgaagaagatgatgatgaaagagcattttctaagtctcaaaatactcctccatctccagc 120 Query: 496 accaagagcattcaaacctggaaagaaagaatccggaccatcagctattgctgaatatga 555 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 accaagagcatccaaacctggaaagaaagaatccggaccatcagctattgctgaatatga 180 Query: 556 ttacgaagcccgggaaagataatgaattgacttttg 591 |||||||| |||| ||||||||||||||||||||| Sbjct: 181 ttacgaag-ccggcgaagataatgaattgacttttg 215 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 9679 Number of Sequences: 1807 Number of extensions: 9679 Number of successful extensions: 330 Number of sequences better than 1.0e-20: 1 length of query: 1146 length of database: 10,358,551 effective HSP length: 16 effective length of query: 1130 effective length of database: 10,329,639 effective search space: 11672492070 effective search space used: 11672492070 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)