BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC6ZH09RM1.SCF screened BAC_end (1032 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig731 973 0.0 >3x_Contig731 Length = 3248 Score = 973 bits (491), Expect = 0.0 Identities = 517/523 (98%), Gaps = 2/523 (0%) Strand = Plus / Minus Query: 76 cttaatttccaatttaagtgttatgaacctctctcctggtccagtcttaaaccctctaat 135 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1496 cttaatttccaatttaagtgttatgaacctctctcctggtccagtcttaaaccctctaat 1437 Query: 136 gtatcctacatcgctaaagccatttcagcttagaaagtgtaaaagacaataccttgatgg 195 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1436 gtatcctacatcgctaaagccatttcagcttagaaagtgtaaaagacaataccttgatgg 1377 Query: 196 aaataacgacaagttgtacagaaagtagcgcacagcgtcttgttttaacggcagaatata 255 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1376 aaataacgacaagttgtacagaaagtagcgcacagcgtcttgttttaacggcagaatata 1317 Query: 256 tatatacagtttaatctcataacaaccgcagttgtccccaaataccttattgttcccatc 315 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1316 tatatacagtttaatctcataacaaccgcagttgtccccaaataccttattgttcccatc 1257 Query: 316 tctagtgatgaaaacttttcttcatcattactgatgggcaacatacatgaaaaaaaattg 375 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1256 tctagtgatgaaaacttttcttcatcattactgatgggcaacatacatgaaaaaaaattg 1197 Query: 376 taaaatctctaattcatcaacttacctttaccagcgaataattcaacgacaggcaactct 435 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1196 taaaatctctaattcatcaacttacctttaccagcgaataattcaacgacaggcaactct 1137 Query: 436 atctcattctatttcctaatccaaaatcgtgtattaactgaacttggtattcatatctta 495 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1136 atctcattctatttcctaatccaaaatcgtgtattaactgaacttggtattcatatctta 1077 Query: 496 ataatataatatgttttaatttttctattcttctttgaagtttgtaaatcaattcataac 555 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1076 ataatataatatgttttaatttttctatttttctttgaagtttgtaaatcaattcataac 1017 Query: 556 ttttttttattgcaacaaaagagtacaattcataagaaaaacc 598 || |||||||||||||| |||||||| |||||||||||||| Sbjct: 1016 -ttagtttattgcaacaaaggagtacaa-tcataagaaaaacc 976 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 12,725 Number of Sequences: 1807 Number of extensions: 12725 Number of successful extensions: 74 Number of sequences better than 1.0e-20: 1 length of query: 1032 length of database: 10,358,551 effective HSP length: 16 effective length of query: 1016 effective length of database: 10,329,639 effective search space: 10494913224 effective search space used: 10494913224 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)