BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC6ZH10FM1.SCF screened BAC_end (925 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1529 656 0.0 >3x_Contig1529 Length = 11812 Score = 656 bits (331), Expect = 0.0 Identities = 421/447 (94%), Gaps = 3/447 (0%) Strand = Plus / Plus Query: 90 tcattactttgactactgcattgatttacttatttggccaattcccactggcaggcatta 149 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11290 tcattactttgactactgcattgatttacttatttggccaattcccactggcaggcatta 11349 Query: 150 ctaaggaatctgttgatgtgaaggaccctatcttcttcttgcgtggtgttttcgctgccg 209 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11350 ctaaggaatctgttgatgtgaaggaccctatcttcttcttgcgtggtgttttcgctgccg 11409 Query: 210 aaccactcttttttttagagtttggtattttcccaccaattgcaactgcattgatcttgc 269 |||||| | | |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11410 aaccacgcactcttttagagtttggtattttcccaccaattgcaactgcattgatcttgc 11469 Query: 270 aattg-ttggcaggtttcaaattgatcaaagtcaacttcaaccaaagaactgatagagaa 328 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11470 aattgcttggcaggtttcaaattgatcaaagtcaacttcaaccaaagaactgatagagaa 11529 Query: 329 ttgttccaaacgttgatcaaaattgtttccattggcagttatgccattttagctaacatt 388 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 11530 ttgttccaaacgttgatcaaaattgtttccattggcagttatgccatcttagctaacatt 11589 Query: 389 ttcattgcatcaagttactatgggcaaaatttatctcttatggctaaattttttgataac 448 |||||||||||| |||||||||| || |||||||||| |||||||||||||| |||| Sbjct: 11590 ttcattgcatcaggttactatggcgaagatttatctctaatggctaaatttttgattaac 11649 Query: 449 agtcaattgattcgggccgttttttttgtgaccttgttgatccaaagtttttgacagggg 508 ||||||||||| | |||| ||| ||||||||||||||||| | ||||| |||||| || Sbjct: 11650 agtcaattgatcggcgccggtttctttgtgaccttgttgat-cgaagttattgaca-agg 11707 Query: 509 ggcttgggtttgcctttggtgccatgg 535 ||| ||||||||||| ||||||||||| Sbjct: 11708 ggcatgggtttgcctctggtgccatgg 11734 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 9699 Number of Sequences: 1807 Number of extensions: 9699 Number of successful extensions: 68 Number of sequences better than 1.0e-20: 1 length of query: 925 length of database: 10,358,551 effective HSP length: 16 effective length of query: 909 effective length of database: 10,329,639 effective search space: 9389641851 effective search space used: 9389641851 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)