BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC7ZA01RM1.SCF screened BAC_end (954 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1642 680 0.0 >3x_Contig1642 Length = 16641 Score = 680 bits (343), Expect = 0.0 Identities = 382/395 (96%) Strand = Plus / Minus Query: 41 caagctttggcgttgctgctatttgtttatttaagcatcatactggaatttccaagacag 100 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7821 caagctttggcgttgctgctatttgtttatttaagcatcatactggaatttccaagacag 7762 Query: 101 caatattgtacgggttagcacacttcttacgtactgcttactatgttgactatttgaaaa 160 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7761 caatattgtacgggttagcacacttcttacgtactgcttactatgttgactatttgaaaa 7702 Query: 161 gaagaatgaagtagtaccgtttcgaagattattttttctttgtgactatacaaatgatat 220 ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| || Sbjct: 7701 gaagaatgaagtagtaccgtttcgaagattattttttctttgtcactatacaaatgacat 7642 Query: 221 gcttgtgccactgagcaatgtgataaagggaacttagtgttccggttctaatgtttgctg 280 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 7641 gcttgtgccactgagcaatgtgataaagggaacttagtgttccggttctaatgttttctg 7582 Query: 281 gttttgcaaaagctatgagctttattttataaaaagaatagaatatattttataccttaa 340 |||||||||||||||||||||||| |||||||||||||||||| |||||||| ||||||| Sbjct: 7581 gttttgcaaaagctatgagctttagtttataaaaagaatagaagatattttagaccttaa 7522 Query: 341 actatcggtggcgtagattgtaagtttgaacgttctatgtacgtttgtatgcgattattg 400 |||| |||||||||||| |||||||||||||||||||| ||||||| ||||||| |||| Sbjct: 7521 actagcggtggcgtagagtgtaagtttgaacgttctatatacgtttctatgcgagtattt 7462 Query: 401 ttttttgctttactacgtaaatatcgcttatgcat 435 |||||| |||||||||||||||||||||||||||| Sbjct: 7461 ttttttcctttactacgtaaatatcgcttatgcat 7427 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5175 Number of Sequences: 1807 Number of extensions: 5175 Number of successful extensions: 50 Number of sequences better than 1.0e-20: 1 length of query: 954 length of database: 10,358,551 effective HSP length: 16 effective length of query: 938 effective length of database: 10,329,639 effective search space: 9689201382 effective search space used: 9689201382 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)