BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC7ZA05RM1.SCF screened BAC_end (949 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig596 1197 0.0 >3x_Contig596 Length = 2286 Score = 1197 bits (604), Expect = 0.0 Identities = 658/672 (97%), Gaps = 3/672 (0%) Strand = Plus / Minus Query: 47 ttaagttaagaagtaccactaaatggcccaacttgttttgaagattttcattgctgagca 106 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 954 ttaagttaagaagtaccactaaatggcccaacttgttttgaagattttcattgctgagca 895 Query: 107 tatcaacaaatgacttagcgacttcgttaaaaattcttaattcaatagaaagatcagcag 166 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 894 tatcaacaaatgacttagcgacttcgttaaaaattcttaattcaatagaaagatcagcag 835 Query: 167 atgctaacgtcattttcctctggtgtgatagtctcaatatcgccctgaatattatggaaa 226 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 834 atgctaacgtcattttcctctggtgtgatagtctcaatatcgccctgaagattatggaaa 775 Query: 227 tgcaggactgcgtggtatggaacaaaaacctgttctgaagagtatttttgaacttagcag 286 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 774 tgcaggactgcgtggtatggaacaaaaacctgttctgaagagtatttttgaacttagcag 715 Query: 287 ccgtgttgtcggttttcacatcattttcagctttagcccccttataaagtagtaaagaag 346 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 714 ccgtgttgtcggttttcacatcattttcagctttagcccccttataaagtagtaaagaag 655 Query: 347 gagtttcgggggatgtcgccggtcttgtttgttctgaaactatgattggcaagcatccac 406 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 654 gagtttcgggggatgtcgccggtcttgtttgttctgaaactatgattggcaagcatccac 595 Query: 407 ggatgtaatactcttccaacgcacacctttcaaaagttgtccttaaaagatggatcaaag 466 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 594 ggatgtaatactcttccaacgcacacctttcaaaagttgtccttaaaagatggatcaaag 535 Query: 467 ataacccgttctcgtcaaagtattcgagtatttgatgaactctttccggaaacaatgaaa 526 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 534 aaaacccgttctcgtcaaagtattcgagtatttgatgaactctttccggaaacaatgaaa 475 Query: 527 agcggtcaatgtacacagaggtaattgtggatacaatgacttgtaagattttcacttttt 586 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 474 agcggtcaatgtacacagaggtaattgtggatacaatgacttgtaagatattcacttttc 415 Query: 587 cgagcgtatttttcacagtatctggatcccaagctc-aaacatatgacttgtcctgatcg 645 |||||||||| |||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 414 gaagcgtattttccacagtatctggat-ccaagctcaaaacatatgacttgtcctgatcg 356 Query: 646 t-attgatgaagtcagaaagatcatccaaagttttttttaaaagtgctaattaggtaggg 704 | |||||||||||||||||||||||||||||| | |||||||||||||||| ||||||| Sbjct: 355 taattgatgaagtcagaaagatcatccaaagtatattttaaaagtgctaataaggtaggt 296 Query: 705 agggcatatttg 716 |||||||||||| Sbjct: 295 agggcatatttg 284 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7636 Number of Sequences: 1807 Number of extensions: 7636 Number of successful extensions: 43 Number of sequences better than 1.0e-20: 1 length of query: 949 length of database: 10,358,551 effective HSP length: 16 effective length of query: 933 effective length of database: 10,329,639 effective search space: 9637553187 effective search space used: 9637553187 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)