BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC7ZA06FM1.SCF screened BAC_end
         (934 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1314                                                        1586   0.0  

>3x_Contig1314 
          Length = 6289

 Score = 1586 bits (800), Expect = 0.0
 Identities = 841/851 (98%), Gaps = 3/851 (0%)
 Strand = Plus / Plus

                                                                        
Query: 86   tcgagtatttggcttcttttattgaagagttgaattgggctgctctgcatttcaatgtga 145
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3278 tcgagtatttggcttcttttattgaagagttgaattgggctgctctgcatttcaatgtga 3337

                                                                        
Query: 146  tggaatggatgaattttttcttcaaaagtgaggtgtaatgagaattcgctgttgcgtaac 205
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3338 tggaatggatgaattttttcttcaaaagtgaggtgtaatgagaattcgctgttgcgtaac 3397

                                                                        
Query: 206  tttccgattttagtttccattgagaaaagtaaaagcgcacaatctttgtgttctgttgaa 265
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3398 tttccgattttagtttccattgagaaaagtaaaagcgcacaatctttgtgttctgttgaa 3457

                                                                        
Query: 266  cgacgtaatcatgactattagttctttcttcgaagcgtttttgccatacatataaaacat 325
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3458 cgacgtaatcatgactattagttctttcttcgaagcgtttttgccatacatataaaacat 3517

                                                                        
Query: 326  atcgttgcagagattcagtgttgcactcttgtaccttcgactcgacattaaccaatttat 385
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3518 atcgttgcagagattcagtgttgcactcttgtaccttcgactcgacattaaccaatttat 3577

                                                                        
Query: 386  ctgctagtaaaatcatttcaaaaaaccttcgtttgatgaatatattacttttttctatga 445
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3578 ctgctagtaaaatcatttcaaaaaaccttcgtttgatgaatatattacttttttctatga 3637

                                                                        
Query: 446  gtttcagctcgtatgcctctttcttttgatattgcgagatccatttattcaaaaacggac 505
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3638 gtttcagctcgtatgcctctttcttttgatattgcgagatccatttattcaaaaacggac 3697

                                                                        
Query: 506  ttagatgaaagtttcgttctgagaaagtcgcgagttctcttaggtatatttcatgtgcat 565
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3698 ttagatgaaagtttcgttctgagaaagtcgcgagttctcttaggtatatttcatgtgcat 3757

                                                                        
Query: 566  acttctttttccattctgtgaagcctttgcaaagtaagtatcgtttcattgtcgttggat 625
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3758 acttctttttccattctgtgaagcctttgcaaagtaagtatcgtttcattgtcgttggat 3817

                                                                        
Query: 626  tataatgaccttcacacatttttagcttccacaacttgaacgatttctgaaggagatgct 685
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3818 tataatgaccttcacacatttttagcttccacaacttgaacgatttctgaaggagatgct 3877

                                                                        
Query: 686  tttgattgacatttttcgttctgttgaagcattgcgttaacctctcgtgtttcgctttta 745
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3878 tttgattgacatttttcgttctgttgaagcattgcgttaacctctcgtgtttcgctttta 3937

                                                                        
Query: 746  tgtttgcaaaggtattatccaagaaaaagttatcagcaatctgcgattttgtatctattt 805
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3938 tgtttgcaaaggtattatccaagaaaaagttatcagcaatctgcgattttgtatctattt 3997

                                                                        
Query: 806  gatggatcctatcaagccatgcatcaaaaaaa-ctgtcttgagtctctggntgtatactt 864
            |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||
Sbjct: 3998 gatggatcctatcaagccatgcatcaaaaaaacctgtcttgagtctctggttgtatactt 4057

                                                                        
Query: 865  cgtctccgttttttacccattccc-gcatttgatattcgtaggttggaacccatcgttga 923
            |||||||||||||||||||||||| |||||||||| ||  | ||| | ||||||||||||
Sbjct: 4058 cgtctccgttttttacccattcccggcatttgata-tcagatgtttggacccatcgttga 4116

                       
Query: 924  aagaatatttt 934
            |||||| ||||
Sbjct: 4117 aagaatttttt 4127


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7703
Number of Sequences: 1807
Number of extensions: 7703
Number of successful extensions: 56
Number of sequences better than 1.0e-20: 1
length of query: 934
length of database: 10,358,551
effective HSP length: 16
effective length of query: 918
effective length of database: 10,329,639
effective search space: 9482608602
effective search space used: 9482608602
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)