BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC7ZA06FM1.SCF screened BAC_end (934 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1314 1586 0.0 >3x_Contig1314 Length = 6289 Score = 1586 bits (800), Expect = 0.0 Identities = 841/851 (98%), Gaps = 3/851 (0%) Strand = Plus / Plus Query: 86 tcgagtatttggcttcttttattgaagagttgaattgggctgctctgcatttcaatgtga 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3278 tcgagtatttggcttcttttattgaagagttgaattgggctgctctgcatttcaatgtga 3337 Query: 146 tggaatggatgaattttttcttcaaaagtgaggtgtaatgagaattcgctgttgcgtaac 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3338 tggaatggatgaattttttcttcaaaagtgaggtgtaatgagaattcgctgttgcgtaac 3397 Query: 206 tttccgattttagtttccattgagaaaagtaaaagcgcacaatctttgtgttctgttgaa 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3398 tttccgattttagtttccattgagaaaagtaaaagcgcacaatctttgtgttctgttgaa 3457 Query: 266 cgacgtaatcatgactattagttctttcttcgaagcgtttttgccatacatataaaacat 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3458 cgacgtaatcatgactattagttctttcttcgaagcgtttttgccatacatataaaacat 3517 Query: 326 atcgttgcagagattcagtgttgcactcttgtaccttcgactcgacattaaccaatttat 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3518 atcgttgcagagattcagtgttgcactcttgtaccttcgactcgacattaaccaatttat 3577 Query: 386 ctgctagtaaaatcatttcaaaaaaccttcgtttgatgaatatattacttttttctatga 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3578 ctgctagtaaaatcatttcaaaaaaccttcgtttgatgaatatattacttttttctatga 3637 Query: 446 gtttcagctcgtatgcctctttcttttgatattgcgagatccatttattcaaaaacggac 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3638 gtttcagctcgtatgcctctttcttttgatattgcgagatccatttattcaaaaacggac 3697 Query: 506 ttagatgaaagtttcgttctgagaaagtcgcgagttctcttaggtatatttcatgtgcat 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3698 ttagatgaaagtttcgttctgagaaagtcgcgagttctcttaggtatatttcatgtgcat 3757 Query: 566 acttctttttccattctgtgaagcctttgcaaagtaagtatcgtttcattgtcgttggat 625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3758 acttctttttccattctgtgaagcctttgcaaagtaagtatcgtttcattgtcgttggat 3817 Query: 626 tataatgaccttcacacatttttagcttccacaacttgaacgatttctgaaggagatgct 685 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3818 tataatgaccttcacacatttttagcttccacaacttgaacgatttctgaaggagatgct 3877 Query: 686 tttgattgacatttttcgttctgttgaagcattgcgttaacctctcgtgtttcgctttta 745 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3878 tttgattgacatttttcgttctgttgaagcattgcgttaacctctcgtgtttcgctttta 3937 Query: 746 tgtttgcaaaggtattatccaagaaaaagttatcagcaatctgcgattttgtatctattt 805 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3938 tgtttgcaaaggtattatccaagaaaaagttatcagcaatctgcgattttgtatctattt 3997 Query: 806 gatggatcctatcaagccatgcatcaaaaaaa-ctgtcttgagtctctggntgtatactt 864 |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 3998 gatggatcctatcaagccatgcatcaaaaaaacctgtcttgagtctctggttgtatactt 4057 Query: 865 cgtctccgttttttacccattccc-gcatttgatattcgtaggttggaacccatcgttga 923 |||||||||||||||||||||||| |||||||||| || | ||| | |||||||||||| Sbjct: 4058 cgtctccgttttttacccattcccggcatttgata-tcagatgtttggacccatcgttga 4116 Query: 924 aagaatatttt 934 |||||| |||| Sbjct: 4117 aagaatttttt 4127 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7703 Number of Sequences: 1807 Number of extensions: 7703 Number of successful extensions: 56 Number of sequences better than 1.0e-20: 1 length of query: 934 length of database: 10,358,551 effective HSP length: 16 effective length of query: 918 effective length of database: 10,329,639 effective search space: 9482608602 effective search space used: 9482608602 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)