BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC7ZA08RM1.SCF screened BAC_end (934 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1794 1332 0.0 >3x_Contig1794 Length = 36744 Score = 1332 bits (672), Expect = 0.0 Identities = 743/763 (97%), Gaps = 3/763 (0%) Strand = Plus / Minus Query: 47 taccaacacatttgttactgttttcgtaaattgttttgattaacagatcactaccagtac 106 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22640 taccaacacatttgttactgttttcgtaaattgttttgattaacagatcactaccagtac 22581 Query: 107 tttgtgatgaggagggaatatagtcctgatgggaaattgctgtctcaattggattctttg 166 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22580 tttgtgatgaggagggaatatagtcctgatgggaaattgctgtctcaattggattctttg 22521 Query: 167 gatcatatacaacatatgcttgaatttgagagtaatcttcgaacaagaactggaaatctc 226 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22520 gatcatatacaacatatgcttgaatttgagagtaatcttcgaacaagaactggaaatctc 22461 Query: 227 tgacaaccaacttatttgtattccttctttcaactatgtgatcctgagattcccagatgt 286 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22460 tgacaaccaacttatttgtattccttctttcaactatgtgatcctgagattcccagatgt 22401 Query: 287 attttactttgcttggtttaacagtatcagcctgaactgtcttagttaaccaccaagtac 346 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22400 attttactttgcttggtttaacagtatcagcctgaactgtcttagttaaccaccaagtac 22341 Query: 347 tttgctttgagaactctaattctggaatagtacctggttcaaatttcgccgtagttgtcc 406 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22340 tttgctttgagaactctaattctggaatagtacctggttcaaatttcgccgtagttgtcc 22281 Query: 407 gtcttaatggctggaaactggccggaatttgtggagcagcagatgaaggagtggctggtg 466 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22280 gtcttaatggctggaaactggccggaatttgtggagcagcagatgaaggagtggctggtg 22221 Query: 467 atgagtttgctgcacctggaatagtctgaattgaaggtcttcgttgcggtgcattagaat 526 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22220 atgagtttgctgcacctggaatagtctgaattgaaggtcttcgttgcggtgcattagaag 22161 Query: 527 gaggcaatggtggagggccgccactgcttggtactggaggagcaggggcagcagcgggct 586 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22160 gaggcaatggtggagggccgccactgcttggtactggaggagcaggggcagcagcgggct 22101 Query: 587 gttttgttggcaggttctgctcagtgttttcggttttaacgcttaaaactggtgcttgag 646 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 22100 gttttgttggcagtttctgctcagtgttttcggttttaacgcttaaaactggtgctggag 22041 Query: 647 cctttgttggtaatggttggacaggtacgcttggaggaacaagagaaatt-gtgcacctg 705 ||||||||||||||||| | ||||||||||||| ||||||| ||| |||| ||||||||| Sbjct: 22040 cctttgttggtaatggtggtacaggtacgcttgaaggaacaggaggaattggtgcacctg 21981 Query: 706 ttggaattggcgggacggaaggagcanatggaattggaggggctggcgggaattttttgt 765 |||||||||||||||||||||||||| ||||||||||||||||| ||||| | ||||||| Sbjct: 21980 ttggaattggcgggacggaaggagcagatggaattggaggggct-gcgggcaatttttgt 21922 Query: 766 ggggcgtttataccttggtgaagtttggggattttgtggggat 808 |||||||| || ||| ||| |||||| ||| ||||||||||| Sbjct: 21921 ggggcgttagtagctt-gtggagtttgtggagtttgtggggat 21880 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7266 Number of Sequences: 1807 Number of extensions: 7266 Number of successful extensions: 66 Number of sequences better than 1.0e-20: 1 length of query: 934 length of database: 10,358,551 effective HSP length: 16 effective length of query: 918 effective length of database: 10,329,639 effective search space: 9482608602 effective search space used: 9482608602 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)