BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC7ZA08RM1.SCF screened BAC_end
         (934 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1794                                                        1332   0.0  

>3x_Contig1794 
          Length = 36744

 Score = 1332 bits (672), Expect = 0.0
 Identities = 743/763 (97%), Gaps = 3/763 (0%)
 Strand = Plus / Minus

                                                                         
Query: 47    taccaacacatttgttactgttttcgtaaattgttttgattaacagatcactaccagtac 106
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22640 taccaacacatttgttactgttttcgtaaattgttttgattaacagatcactaccagtac 22581

                                                                         
Query: 107   tttgtgatgaggagggaatatagtcctgatgggaaattgctgtctcaattggattctttg 166
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22580 tttgtgatgaggagggaatatagtcctgatgggaaattgctgtctcaattggattctttg 22521

                                                                         
Query: 167   gatcatatacaacatatgcttgaatttgagagtaatcttcgaacaagaactggaaatctc 226
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22520 gatcatatacaacatatgcttgaatttgagagtaatcttcgaacaagaactggaaatctc 22461

                                                                         
Query: 227   tgacaaccaacttatttgtattccttctttcaactatgtgatcctgagattcccagatgt 286
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22460 tgacaaccaacttatttgtattccttctttcaactatgtgatcctgagattcccagatgt 22401

                                                                         
Query: 287   attttactttgcttggtttaacagtatcagcctgaactgtcttagttaaccaccaagtac 346
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22400 attttactttgcttggtttaacagtatcagcctgaactgtcttagttaaccaccaagtac 22341

                                                                         
Query: 347   tttgctttgagaactctaattctggaatagtacctggttcaaatttcgccgtagttgtcc 406
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22340 tttgctttgagaactctaattctggaatagtacctggttcaaatttcgccgtagttgtcc 22281

                                                                         
Query: 407   gtcttaatggctggaaactggccggaatttgtggagcagcagatgaaggagtggctggtg 466
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22280 gtcttaatggctggaaactggccggaatttgtggagcagcagatgaaggagtggctggtg 22221

                                                                         
Query: 467   atgagtttgctgcacctggaatagtctgaattgaaggtcttcgttgcggtgcattagaat 526
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 22220 atgagtttgctgcacctggaatagtctgaattgaaggtcttcgttgcggtgcattagaag 22161

                                                                         
Query: 527   gaggcaatggtggagggccgccactgcttggtactggaggagcaggggcagcagcgggct 586
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22160 gaggcaatggtggagggccgccactgcttggtactggaggagcaggggcagcagcgggct 22101

                                                                         
Query: 587   gttttgttggcaggttctgctcagtgttttcggttttaacgcttaaaactggtgcttgag 646
             ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 22100 gttttgttggcagtttctgctcagtgttttcggttttaacgcttaaaactggtgctggag 22041

                                                                         
Query: 647   cctttgttggtaatggttggacaggtacgcttggaggaacaagagaaatt-gtgcacctg 705
             ||||||||||||||||| | ||||||||||||| ||||||| ||| |||| |||||||||
Sbjct: 22040 cctttgttggtaatggtggtacaggtacgcttgaaggaacaggaggaattggtgcacctg 21981

                                                                         
Query: 706   ttggaattggcgggacggaaggagcanatggaattggaggggctggcgggaattttttgt 765
             |||||||||||||||||||||||||| ||||||||||||||||| ||||| | |||||||
Sbjct: 21980 ttggaattggcgggacggaaggagcagatggaattggaggggct-gcgggcaatttttgt 21922

                                                        
Query: 766   ggggcgtttataccttggtgaagtttggggattttgtggggat 808
             ||||||||  || ||| ||| |||||| ||| |||||||||||
Sbjct: 21921 ggggcgttagtagctt-gtggagtttgtggagtttgtggggat 21880


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7266
Number of Sequences: 1807
Number of extensions: 7266
Number of successful extensions: 66
Number of sequences better than 1.0e-20: 1
length of query: 934
length of database: 10,358,551
effective HSP length: 16
effective length of query: 918
effective length of database: 10,329,639
effective search space: 9482608602
effective search space used: 9482608602
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)