BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC7ZA09FM1.SCF screened BAC_end
         (935 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1801                                                        1560   0.0  

>3x_Contig1801 
          Length = 57606

 Score = 1560 bits (787), Expect = 0.0
 Identities = 837/850 (98%), Gaps = 3/850 (0%)
 Strand = Plus / Plus

                                                                         
Query: 87    taagctacctcagcgtagtgaattaccaagaaaactacaagatttgggtctcaagcctgc 146
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20531 taagctacctcagcgtagtgaattaccaagaaaactacaagatttgggtctcaagcctgc 20590

                                                                         
Query: 147   tagtgtggatcctgctacgatcaagaatgagcaaaccacaaggaaagaggtcaagaaacg 206
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20591 tagtgtggatcctgctacgatcaagaatgagcaaaccacaaggaaagaggtcaagaaacg 20650

                                                                         
Query: 207   tagatcaagaaagggtaaagttaccaatacacatatggctggtatattgagagattattc 266
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20651 tagatcaagaaagggtaaagttaccaatacacatatggctggtatattgagagattattc 20710

                                                                         
Query: 267   cgatagggtatgaagatacctactttttataatgaacgtattctacatataacccaaatt 326
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20711 cgatagggtatgaagatacctactttttataatgaacgtattctacatataacccaaatt 20770

                                                                         
Query: 327   aaaatatgaccagtgcgttatatataaataatatacagaaagaccagaacgagtgctcta 386
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20771 aaaatatgaccagtgcgttatatataaataatatacagaaagaccagaacgagtgctcta 20830

                                                                         
Query: 387   gtcgtgctttctcttttttttgctaactttcttcaaatctttatcctcgtaatacccagt 446
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20831 gtcgtgctttctcttttttttgctaactttcttcaaatctttatcctcgtaatacccagt 20890

                                                                         
Query: 447   tgcgaaatgtctagtcttgagacccttaaccttcaacacatcctttctatccactcttac 506
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20891 tgcgaaatgtctagtcttgagacccttaaccttcaacacatcctttctatccactcttac 20950

                                                                         
Query: 507   cttagaataatcaatgcttggaatctttgcagtttcgcttatggtaaagatcttatcaaa 566
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20951 cttagaataatcaatgcttggaatctttgcagtttcgcttatggtaaagatcttatcaaa 21010

                                                                         
Query: 567   tgatcttgatgcagatgaatcgacggtcaactttgtcttatctacaggagtcaataatgt 626
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21011 tgatcttgatgcagatgaatcgacggtcaactttgtcttatctacaggagtcaataatgt 21070

                                                                         
Query: 627   caattcagaagaagaagatgcaccagaagtggaattttcttgttggatttcctccttcac 686
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21071 caattcagaagaagaagatgcaccagaagtggaattttcttgttggatttcctccttcac 21130

                                                                         
Query: 687   agagaaatgttttaccttttgttcgatgccagtttccgactccgctgtgaaatcaatagg 746
             ||||||||||||  | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21131 agagaaatgtttacctttttgttcgatgccagtttccgactccgctgtgaaatcaatagg 21190

                                                                         
Query: 747   taatttcgaaagcttagagacatctaaagatttangaagtttgataagccaaagttcttt 806
             |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 21191 taatttcgaaagcttagagacatctaaagatttaggaagtttgataagccaaagttcttt 21250

                                                                         
Query: 807   ttgccttcagttcttaggctttacggatgatttcaaatgtgtacatttcttatag-tttc 865
             |||| |  ||||||||||||| ||| ||||||||||||||||||||||||||||| ||||
Sbjct: 21251 ttgcttcaagttcttaggcttcacgaatgatttcaaatgtgtacatttcttatagttttc 21310

                                                                         
Query: 866   aagtggaacgaaaacgtccgttacagtttctgatgatccatcattatcgcttgtcgctat 925
             | |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 21311 aggtggaacgaaaacgtccgttacagtttctgatgatccatcattatcgc-tgtcgctat 21369

                       
Query: 926   ccactgatgt 935
              |||||||||
Sbjct: 21370 -cactgatgt 21378


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8171
Number of Sequences: 1807
Number of extensions: 8171
Number of successful extensions: 55
Number of sequences better than 1.0e-20: 1
length of query: 935
length of database: 10,358,551
effective HSP length: 16
effective length of query: 919
effective length of database: 10,329,639
effective search space: 9492938241
effective search space used: 9492938241
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)