BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC7ZA09RM1.SCF screened BAC_end
         (911 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1767                                                        1015   0.0  

>3x_Contig1767 
          Length = 23302

 Score = 1015 bits (512), Expect = 0.0
 Identities = 715/763 (93%), Gaps = 15/763 (1%)
 Strand = Plus / Minus

                                                                         
Query: 48    tttccctcgctggaagattttcaagacttcgtcttttagaagcgaaaaggccgaaacgta 107
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18483 tttccctcgctggaagattttcaagacttcgtcttttagaagcgaaaaggccgaaacgta 18424

                                                                         
Query: 108   gtattattggttcgtatacagtgatactggtagtgaaacttacttttatttatttagttg 167
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18423 gtattattggttcgtatacagtgatactggtagtgaaacttacttttatttatttagttg 18364

                                                                         
Query: 168   cacgtgatctaaaatggttagataatatatgctttacctacttctttctgtggtatattt 227
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18363 cacgtgatctaaaatggttagataatatatgctttacctacttctttctgtggtatattt 18304

                                                                         
Query: 228   tgttcaagaacaaggttagaacttcggccttgaacccacgggattcgtcgatgttagcga 287
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18303 tgttcaagaacaaggttagaacttcggccttgaacccacgggattcgtcgatgttagcga 18244

                                                                         
Query: 288   ttttctctcttaagttggaagcggtttcttcttcgtacttgtggtagatgtcttggatgt 347
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18243 ttttctctcttaagttggaagcggtttcttcttcgtacttgtggtagatgtcttggatgt 18184

                                                                         
Query: 348   tcaattcgttgaatacagctctacatttttgttccttttcagaatcctttctaccgtagt 407
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18183 tcaattcgttgaatacagctctacatttttgttccttttcagaatcctttctaccgtagt 18124

                                                                         
Query: 408   tttcgtccaagatatctctttgttcttttgtagcattcttcaatgcaacgttgatgaccc 467
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18123 tttcgtccaagatatctctttgttcttttgtagcattcttcaatgcaacgttgatgaccc 18064

                                                                         
Query: 468   aagaacatttgntgtcttggatatcggtaccattcttaccgatatcttctggttta-cga 526
             ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| |||
Sbjct: 18063 aagaacatttgttgtcttggatatcggtaccaatcttaccgatatcttctggtttaccga 18004

                                                                         
Query: 527   aacaat-caagaaattgtctt-gatttggaaaatattctccc-atgggatcaatacgtcg 583
             |||||| |||||||| ||||| ||||||| |||||||||||| |||||||||||||||||
Sbjct: 18003 aacaatccaagaaatcgtcttggatttgg-aaatattctcccaatgggatcaatacgtcg 17945

                                                                         
Query: 584   ctgggctgttt-aagttcttttgatcggtatta-cggcagcaaacatgggccagtg-cac 640
             |||| |||||| |||| ||||   |||||| || ||||||||||||| |||||||| |||
Sbjct: 17944 ctggcctgtttcaagtcctttgagtcggtaataccggcagcaaacat-ggccagtgccac 17886

                                                                         
Query: 641   tgcttattaaaaaga-tagtattgcag-cttgaagattacgatgaaagaatgccttttca 698
             |||| | || ||||| ||||| ||||| ||||||||| |||||||| |||||| ||| ||
Sbjct: 17885 tgctaagtagaaagagtagta-tgcagtcttgaagataacgatgaaggaatgcttttcca 17827

                                                                         
Query: 699   aa-aaaacttggttaaatcaacttggtccttggggccaaggatcaaattccacaactggc 757
             || | ||||||| ||| || |||| |||||  ||  ||  |||||||| | |||||| | 
Sbjct: 17826 aagagaacttggataagtcgactttgtcctctggtgcagtgatcaaatccaacaact-ga 17768

                                                        
Query: 758   cccaattgggtttgaaaagttaacgtctaggaacaattccaat 800
             ||||||| ||||||||||| |||||||  ||||||||||||||
Sbjct: 17767 cccaattcggtttgaaaag-taacgtcatggaacaattccaat 17726


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7878
Number of Sequences: 1807
Number of extensions: 7878
Number of successful extensions: 52
Number of sequences better than 1.0e-20: 1
length of query: 911
length of database: 10,358,551
effective HSP length: 16
effective length of query: 895
effective length of database: 10,329,639
effective search space: 9245026905
effective search space used: 9245026905
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)