BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC7ZA09RM1.SCF screened BAC_end (911 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1767 1015 0.0 >3x_Contig1767 Length = 23302 Score = 1015 bits (512), Expect = 0.0 Identities = 715/763 (93%), Gaps = 15/763 (1%) Strand = Plus / Minus Query: 48 tttccctcgctggaagattttcaagacttcgtcttttagaagcgaaaaggccgaaacgta 107 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18483 tttccctcgctggaagattttcaagacttcgtcttttagaagcgaaaaggccgaaacgta 18424 Query: 108 gtattattggttcgtatacagtgatactggtagtgaaacttacttttatttatttagttg 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18423 gtattattggttcgtatacagtgatactggtagtgaaacttacttttatttatttagttg 18364 Query: 168 cacgtgatctaaaatggttagataatatatgctttacctacttctttctgtggtatattt 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18363 cacgtgatctaaaatggttagataatatatgctttacctacttctttctgtggtatattt 18304 Query: 228 tgttcaagaacaaggttagaacttcggccttgaacccacgggattcgtcgatgttagcga 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18303 tgttcaagaacaaggttagaacttcggccttgaacccacgggattcgtcgatgttagcga 18244 Query: 288 ttttctctcttaagttggaagcggtttcttcttcgtacttgtggtagatgtcttggatgt 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18243 ttttctctcttaagttggaagcggtttcttcttcgtacttgtggtagatgtcttggatgt 18184 Query: 348 tcaattcgttgaatacagctctacatttttgttccttttcagaatcctttctaccgtagt 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18183 tcaattcgttgaatacagctctacatttttgttccttttcagaatcctttctaccgtagt 18124 Query: 408 tttcgtccaagatatctctttgttcttttgtagcattcttcaatgcaacgttgatgaccc 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18123 tttcgtccaagatatctctttgttcttttgtagcattcttcaatgcaacgttgatgaccc 18064 Query: 468 aagaacatttgntgtcttggatatcggtaccattcttaccgatatcttctggttta-cga 526 ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 18063 aagaacatttgttgtcttggatatcggtaccaatcttaccgatatcttctggtttaccga 18004 Query: 527 aacaat-caagaaattgtctt-gatttggaaaatattctccc-atgggatcaatacgtcg 583 |||||| |||||||| ||||| ||||||| |||||||||||| ||||||||||||||||| Sbjct: 18003 aacaatccaagaaatcgtcttggatttgg-aaatattctcccaatgggatcaatacgtcg 17945 Query: 584 ctgggctgttt-aagttcttttgatcggtatta-cggcagcaaacatgggccagtg-cac 640 |||| |||||| |||| |||| |||||| || ||||||||||||| |||||||| ||| Sbjct: 17944 ctggcctgtttcaagtcctttgagtcggtaataccggcagcaaacat-ggccagtgccac 17886 Query: 641 tgcttattaaaaaga-tagtattgcag-cttgaagattacgatgaaagaatgccttttca 698 |||| | || ||||| ||||| ||||| ||||||||| |||||||| |||||| ||| || Sbjct: 17885 tgctaagtagaaagagtagta-tgcagtcttgaagataacgatgaaggaatgcttttcca 17827 Query: 699 aa-aaaacttggttaaatcaacttggtccttggggccaaggatcaaattccacaactggc 757 || | ||||||| ||| || |||| ||||| || || |||||||| | |||||| | Sbjct: 17826 aagagaacttggataagtcgactttgtcctctggtgcagtgatcaaatccaacaact-ga 17768 Query: 758 cccaattgggtttgaaaagttaacgtctaggaacaattccaat 800 ||||||| ||||||||||| ||||||| |||||||||||||| Sbjct: 17767 cccaattcggtttgaaaag-taacgtcatggaacaattccaat 17726 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7878 Number of Sequences: 1807 Number of extensions: 7878 Number of successful extensions: 52 Number of sequences better than 1.0e-20: 1 length of query: 911 length of database: 10,358,551 effective HSP length: 16 effective length of query: 895 effective length of database: 10,329,639 effective search space: 9245026905 effective search space used: 9245026905 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)