BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC7ZA10RM1.SCF screened BAC_end (914 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1358 1009 0.0 >3x_Contig1358 Length = 7912 Score = 1009 bits (509), Expect = 0.0 Identities = 643/677 (94%), Gaps = 8/677 (1%) Strand = Plus / Plus Query: 48 ataacaatgtgtcctgaatacttagccgctgtactgatttccgaatccaaatacttttcc 107 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88 ataacaatgt-tcctgaatacttagccgctgtactgatttccgaatccaaatacttttcc 146 Query: 108 ctgcttgttgataataagtcaattattgattagctattaatttctcttgtaataaagacc 167 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 147 ctgcttgttgataataagtcaattattgatgagctattaatttctcttgtaataaagacc 206 Query: 168 tacgaaaacaatgttattgcattcaaagaactactcaaattggtttccaaacaaaaagtt 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 207 tacgaaaacaatgttattgcattcaaagaactactcaaattggtttccaaacaaaaagtt 266 Query: 228 atcgaggttagcagatgtatcatatcatcacaaaacgctcaaaccataaacttagttcaa 287 ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| Sbjct: 267 atcgaggttagcagaggtatcatagcatcacaaaacgctcaaaccataaacttagttcag 326 Query: 288 gctttacacgatttgggcattttggatgaagtatttgagaagttgccgatcatggactcc 347 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 327 gctttacacgatttgggcattttggatgaagtatttgagaagttgccgatcagggactcc 386 Query: 348 ctaaaactatctcctacagctatgcatctcgggtatttgaaattctccgaatatattgaa 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 387 ctaaaactatctcctacagctatgcatctcgggtatttgaaattctccgaatatattgaa 446 Query: 408 agaaacatcaccttgaaaactttcgtaccaacattagactttatagatgctcaaacgaac 467 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 447 agaaacatcaccttgaaaactttcgtaccaacattagactttatagaggctcaaacgaac 506 Query: 468 attgatgaactggaccctgctttgaaatctgt-aaattgtaaaaccttcatttcttgcac 526 |||||||||||||||||||||||||||||||| ||||||| ||||||||||| ||||||| Sbjct: 507 attgatgaactggaccctgctttgaaatctgtaaaattgttaaaccttcattccttgcac 566 Query: 527 attttgatttaccgcacggcgaatttgaaattttctgcagacaaaagggtcgccttaaac 586 | |||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||| Sbjct: 567 agtttgatttaccgcacggcgaatttgaaattatctgcagacgaaagggtcgccttaaac 626 Query: 587 aacgtcatatttaaaggctctaattcaactttcc-agattgatcaatttttggatatggg 645 |||||||||||| |||||||||| ||| |||||| ||||||||||| || ||||||| || Sbjct: 627 aacgtcatattt-aaggctctaa-tcagctttccaagattgatcaa-ttatggatat-gg 682 Query: 646 ccataatgattccatcttcccaaatggggaccattgctctatttccaaaagattttgaaa 705 ||| ||||| ||||| || ||||||||||||| ||||| ||||| | ||| |||||| Sbjct: 683 tcatgatgatgccatcgtcgcaaatggggacca-tgctcctattccacaggatgttgaaa 741 Query: 706 aaaaaaagcaaacatat 722 | |||| |||||||||| Sbjct: 742 agaaaatgcaaacatat 758 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 10,537 Number of Sequences: 1807 Number of extensions: 10537 Number of successful extensions: 72 Number of sequences better than 1.0e-20: 1 length of query: 914 length of database: 10,358,551 effective HSP length: 16 effective length of query: 898 effective length of database: 10,329,639 effective search space: 9276015822 effective search space used: 9276015822 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)