BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC7ZA12RM1.SCF screened BAC_end (926 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1487 1334 0.0 3x_Contig1762 100 1e-20 3x_Contig1623 100 1e-20 3x_Contig17 100 1e-20 >3x_Contig1487 Length = 9002 Score = 1334 bits (673), Expect = 0.0 Identities = 746/763 (97%), Gaps = 6/763 (0%) Strand = Plus / Plus Query: 48 cgctaggctattaacccaaagcgagaatcataccactagaccacacgcccatataaaatt 107 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5403 cgctaggctattaacccaaagcgagaatcataccactagaccacacgcccatataaaatt 5462 Query: 108 agttggatgttaagaagagaagtgattgatgtattccaaatgcaaagtcatagtattttt 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5463 agttggatgttaagaagagaagtgattgatgtattccaaatgcaaagtcatagtattttt 5522 Query: 168 ttccaa-cagccttggctgatacaggcactacagcactgaaagcataacatatattatgt 226 |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 5523 ttccaaacagccttggctgatacaggcactacagcactgaaagcataacaaatattatgt 5582 Query: 227 gtactcctatgttcggtaccaatccgataatgtcgagatgcatacagggtacctagatgc 286 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5583 gtactcctatgttcggtaccaatccgataatgtcgagatgcatacagggtacctagatgc 5642 Query: 287 acagccttctgtaaatatctgacacatatatatatataaatatgtatatgtgtcagatat 346 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5643 acagccttctgtaaatatctgacacatatatatatataaatatgtatatgtgtcagatat 5702 Query: 347 tccgtcattggggggatacatattaaaaactctggacaactggtagcagcccagagaaca 406 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5703 tccgtcattggggggatacatattaaaaactctggacaactggtagcagcccagagaaca 5762 Query: 407 caatgaagtatctgcttttactactactattactgtcctccatatgcacctgtaccccga 466 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5763 caatgaagtatctgcttttactactactattactgtcctccatatgcacctgtaccccga 5822 Query: 467 tactacctggcccctgccccaatgcaacttctatcctgtatccgatctct-ataagaatt 525 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 5823 tactacctggcccctgccccaatgcaacttctatcctgtatccgatctctaataagaatt 5882 Query: 526 ctcgaattcaatctctcatcgagagggtacttgtggccatagaaaaggaaacagaaacta 585 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5883 ctcgaattcaatctctcatcgagagggtacttgtggccatagaaaaggaaacagaaacta 5942 Query: 586 atactacctcgacgacctcaattgaacccacgacatgcgacgaagtaacttggtataatg 645 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5943 atactacctcgacgacctcaattgaacccacgacatgcgacgaagtaacttggtataatg 6002 Query: 646 tcgtatattatggattattttgnagagaagcnnggtctgcactgatgtgttaagacctgc 705 |||||||| |||||||| |||| |||||||| | |||||||||||||| |||||||||| Sbjct: 6003 tcgtatatcatggatta-tttggagagaagc-ggttctgcactgatgtg-taagacctgc 6059 Query: 706 ctgccaatacaccagagcatgatttcttttcacataatttggataataataatttgagtt 765 ||||||||||||||||||||||||||||| || ||||| || ||||||||||| ||||| Sbjct: 6060 ctgccaatacaccagagcatgatttctttcca-ataatatgaataataataatatgagta 6118 Query: 766 tattgttagcaagaaatcgaattcttcaaacataatacatact 808 |||||||||||||||||||||| |||||||||||||||||||| Sbjct: 6119 tattgttagcaagaaatcgaatccttcaaacataatacatact 6161 >3x_Contig1762 Length = 22098 Score = 99.6 bits (50), Expect = 1e-20 Identities = 50/50 (100%) Strand = Plus / Minus Query: 48 cgctaggctattaacccaaagcgagaatcataccactagaccacacgccc 97 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6159 cgctaggctattaacccaaagcgagaatcataccactagaccacacgccc 6110 >3x_Contig1623 Length = 14379 Score = 99.6 bits (50), Expect = 1e-20 Identities = 50/50 (100%) Strand = Plus / Plus Query: 48 cgctaggctattaacccaaagcgagaatcataccactagaccacacgccc 97 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7079 cgctaggctattaacccaaagcgagaatcataccactagaccacacgccc 7128 >3x_Contig17 Length = 819 Score = 99.6 bits (50), Expect = 1e-20 Identities = 50/50 (100%) Strand = Plus / Plus Query: 48 cgctaggctattaacccaaagcgagaatcataccactagaccacacgccc 97 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 209 cgctaggctattaacccaaagcgagaatcataccactagaccacacgccc 258 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 10,399 Number of Sequences: 1807 Number of extensions: 10399 Number of successful extensions: 533 Number of sequences better than 1.0e-20: 4 length of query: 926 length of database: 10,358,551 effective HSP length: 16 effective length of query: 910 effective length of database: 10,329,639 effective search space: 9399971490 effective search space used: 9399971490 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)