BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FJ0AC7ZB03FM1.SCF screened BAC_end
(957 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1524 1651 0.0
>3x_Contig1524
Length = 11623
Score = 1651 bits (833), Expect = 0.0
Identities = 866/873 (99%), Gaps = 3/873 (0%)
Strand = Plus / Plus
Query: 86 tgtcatcctttgcttacacttatgaattaagaacttgttccaatacagtaaatgttcatc 145
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9373 tgtcatcctttgcttacacttatgaattaagaacttgttccaatacagtaaatgttcatc 9432
Query: 146 gatctgtgctaatgcctttgtgtttttcttagatagtttcactctttcccacaatttagc 205
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 9433 gatctgtgctaatgcctttgtgtaattcttagatagtttcactctttcccacaatttagc 9492
Query: 206 aggcgtgtgtagctttttc-gcggtcttcatgtacaagtaaagtgttccgtccacgttct 264
||||||||| |||| |||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 9493 aggcgtgtg-agctctttccgcggtcttcatgtacaagtaaagtgttccgtccacgttct 9551
Query: 265 ttacagtggcatatttactatttgccaaaggacacgcttgtctcgaacataaacctgtta 324
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9552 ttacagtggcatatttactatttgccaaaggacacgcttgtctcgaacataaacctgtta 9611
Query: 325 cgttgtattcatttctacagaagttctgtcccttatcagttttgactttgtacgcacaaa 384
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9612 cgttgtattcatttctacagaagttctgtcccttatcagttttgactttgtacgcacaaa 9671
Query: 385 agtgctggttgataacctgccaaatgatctcgtcagacatctgctaatgttcagtcaatc 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9672 agtgctggttgataacctgccaaatgatctcgtcagacatctgctaatgttcagtcaatc 9731
Query: 445 ctacagatactggtttatgcttagtatgagtttatttaaattggttatgactatcgctaa 504
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9732 ctacagatactggtttatgcttagtatgagtttatttaaattggttatgactatcgctaa 9791
Query: 505 gtttacttgctattccgctagtcgctgcttctttcatttcatctcatctcatcgcatcgc 564
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9792 gtttacttgctattccgctagtcgctgcttctttcatttcatctcatctcatcgcatcgc 9851
Query: 565 atcgatatttttcagttctcaaaaattttcaggcagaaagagaaaaaagaaatggattac 624
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9852 atcgatatttttcagttctcaaaaattttcaggcagaaagagaaaaaagaaatggattac 9911
Query: 625 taaatttttagtcacatgaccaatgatattttattgttataatcggaaacttaatcaaga 684
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9912 taaatttttagtcacatgaccaatgatattttattgttataatcggaaacttaatcaaga 9971
Query: 685 gtcggaatatgcatgattagatctaaagagattaaccttcattcaaatatgttcgaaaaa 744
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9972 gtcggaatatgcatgattagatctaaagagattaaccttcattcaaatatgttcgaaaaa 10031
Query: 745 aatgtggatgaaactatttgaaactgataaaatcgtgtgttgatatatatattatatgaa 804
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10032 aatgtggatgaaactatttgaaactgataaaatcgtgtgttgatatatatattatatgag 10091
Query: 805 gtgaaatgaactgagactaactagttctatgtcaaatactttactcgacattaaagaatt 864
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10092 gtgaaatgaactgagactaactagttctatgtcaaatactttactcgacattaaagaatt 10151
Query: 865 aaattggggatttatgtgaaattgaa-tgatttcgtcatgggacaatgatgtgatgtaaa 923
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 10152 aaattggggatttatgtgaaattgaattgatttcgtcatgggacaatgatgtgatgtaaa 10211
Query: 924 cacacttgcttaacaactcatggtcaatatcaa 956
|||||||||||||||||||||||||||||||||
Sbjct: 10212 cacacttgcttaacaactcatggtcaatatcaa 10244
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8695
Number of Sequences: 1807
Number of extensions: 8695
Number of successful extensions: 385
Number of sequences better than 1.0e-20: 1
length of query: 957
length of database: 10,358,551
effective HSP length: 16
effective length of query: 941
effective length of database: 10,329,639
effective search space: 9720190299
effective search space used: 9720190299
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 51 (101.6 bits)