BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC7ZB07FM1.SCF screened BAC_end (942 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1623 1368 0.0 >3x_Contig1623 Length = 14379 Score = 1368 bits (690), Expect = 0.0 Identities = 735/746 (98%), Gaps = 3/746 (0%) Strand = Plus / Plus Query: 86 acaggcaccgatcgtataatatagtggtagtagtagcagtatagtaattatacagagtat 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9527 acaggcaccgatcgtataatatagtggtagtagtagcagtatagtaattatacagagtat 9586 Query: 146 atagctcgaacaagtattatttcgatgcgatgataaaaccaacgatagggtcgagacact 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9587 atagctcgaacaagtattatttcgatgcgatgataaaaccaacgatagggtcgagacact 9646 Query: 206 aatcttttgttttgtt-tgagaaaccgaaaaagaatgcgcctcaaagactcttagggcta 264 ||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9647 aatcttttgctttgtaatgagaaaccgaaaaagaatgcgcctcaaagactcttagggcta 9706 Query: 265 ccctcattttagacctcttcaccttacaattctcagtatcgctataccggattctgatcg 324 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9707 ccctcattttagacctcttcaccttacaattctcagtatcgctataccggattctgatcg 9766 Query: 325 ccagttacgtcttttgctatgggctggaaatggatatttaacgttgtcttctttaacggg 384 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9767 ccagttacgtcttttgctatgggctggaaatggatatttaacgttgtcttctttaacggg 9826 Query: 385 ttcataggaagttccgtaaaggttttgctttaatagcaaagcaaatagcaaaacaaccaa 444 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9827 ttcataggaagttccgtaaaggttttgctttaatagcaaagcaaatagcaaaacaaccaa 9886 Query: 445 gaaaagtgcacagaggtcgcagcgctacccaacagaggccgagtgtaaggatttagtacg 504 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9887 gaaaagtgcacagaggtcgcagcgctacccaacagaggccgagtgtaaggatttagtacg 9946 Query: 505 atacactacgagaaaataagggtagtatgtgttaacgacgcaaacgaacagaggagagag 564 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9947 atacactacgagaaaataagggtagtatgtgttaacgacgcaaacgaacagaggagagag 10006 Query: 565 gagactactacttcctggattacttcctgatggagttaccggattatcgagagaaagagg 624 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10007 gagactactacttcctggattacttcctgatggagttaccggattatcgagagaaagagg 10066 Query: 625 gagagataaacacgagataccctcaatgttgctttaagggtattacggtgggtacagaag 684 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10067 gagagataaacacgagataccctcaatgttgctttaagggtattacggtgggtacagaag 10126 Query: 685 acgtaagtaatggttggatttgtcgtatggtttggtgtttcgcagtaatagctgcacgct 744 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10127 acgtaagtaatggttggatttgtcgtatggtttggtgtttcgcagtaatagctgcacgct 10186 Query: 745 tgcagagcagtcacttattaatgattagctgaaggtttatgctgttttatacagtgcttg 804 |||||||||||||||||||||||||||||||||||| || |||| | |||||||||| || Sbjct: 10187 tgcagagcagtcacttattaatgattagctgaaggtcta-gctgctctatacagtgc-tg 10244 Query: 805 gaaaagtatttaatctgcctcaatgg 830 ||||||||| ||| ||| |||||||| Sbjct: 10245 gaaaagtatataaactggctcaatgg 10270 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4977 Number of Sequences: 1807 Number of extensions: 4977 Number of successful extensions: 36 Number of sequences better than 1.0e-20: 1 length of query: 942 length of database: 10,358,551 effective HSP length: 16 effective length of query: 926 effective length of database: 10,329,639 effective search space: 9565245714 effective search space used: 9565245714 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)