BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC7ZB08FM1.SCF screened BAC_end (888 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1216 1479 0.0 >3x_Contig1216 Length = 5132 Score = 1479 bits (746), Expect = 0.0 Identities = 790/802 (98%), Gaps = 2/802 (0%) Strand = Plus / Plus Query: 89 ccccgttatatttctgaagttttggtcgtacgatagttcacggaatacttcatactcgta 148 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4160 ccccgttatatttctgaagttttggtcgtacgatagttcacggaatacttcatactcgta 4219 Query: 149 tttgagttgcgactttaatgtctctagctgaataaattcatactgtgatgtaacaccatc 208 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4220 tttgagttgcgactttaatgtctctagctgaataaattcatactgtgatgtaacaccatc 4279 Query: 209 gccactctttgaagaaaggaagaatagaaggattataataaaaaatataatcctactgtt 268 ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4280 gccactcggtgaagaaaggaagaatagaaggattataataaaaaatataatcctactgtt 4339 Query: 269 atctgtactcatattgggggttggggtcagcgcagtagctctggcggttgttgtcttccc 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4340 atctgtactcatattgggggttggggtcagcgcagtagctctggcggttgttgtcttccc 4399 Query: 329 ctaggatcgactattgtcagttatttaaagggtttcgatcttaacatttgatattagaaa 388 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4400 ctaggatcgactattgtcagttatttaaagggtttcgatcttaacatttgatattagaaa 4459 Query: 389 aaaatgtatttaaatgttttagctacagaaagaataagtgtgctgactatgaattgtacg 448 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4460 aaaatgtatttaaatgttttagctacagaaagaataagtgtgctgactatgaattgtacg 4519 Query: 449 aggaagaaaattacttaacggtattactcgtagcctacgcttcagaaaaggacgaattta 508 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4520 aggaagaaaattacttaacggtattactcgtagcctacgcttcagaaaaggacgaattta 4579 Query: 509 tgaattgagctatcaacagttagaacaaagtatttgaacatggtgcattgttataggttc 568 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4580 tgaattgagctatcaacagttagaacaaagtatttgaacatggtgcattgttataggttc 4639 Query: 569 aaagaccaattccttagtgcagataatagaattttgagttttgttattaatgtcggggtt 628 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4640 aaagaccaattccttagtgcagataatagaattttgagttttgttattaatgtcggggtt 4699 Query: 629 gagtgttaaatacttgttatatataattcagcgaaacaactactttgcattgttgaagct 688 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4700 gagtgttaaatacttgttatatataattcagcgaaacaactactttgcattgttgaagct 4759 Query: 689 caggctacgagttcatcataagtgtggcatgtgtctttttctttgatatgcgacgtaatt 748 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4760 caggctacgagttcatcataagtgtggcatgtgtctttttctttgatatgcgacgtaatt 4819 Query: 749 ccaagtattaatgtttgttaacgttcattaaagctcagtgctctaatatttgtaaagtac 808 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 4820 ccaagtattaatgtttgttaacgttcattaaagctcagtgctctaatatttgtaagttac 4879 Query: 809 cagtaataacaacgttctcc-aaacagattcattagggatatcaattttttgaccttcaa 867 |||||||||||||||||||| |||||||| ||||||||||||||||| | ||||||||| Sbjct: 4880 cagtaataacaacgttctccaaaacagatccattagggatatcaattctatgaccttcag 4939 Query: 868 agc-aacaaggatcacatttcc 888 ||| ||||| ||||||| |||| Sbjct: 4940 agcaaacaatgatcacagttcc 4961 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7075 Number of Sequences: 1807 Number of extensions: 7075 Number of successful extensions: 47 Number of sequences better than 1.0e-20: 1 length of query: 888 length of database: 10,358,551 effective HSP length: 16 effective length of query: 872 effective length of database: 10,329,639 effective search space: 9007445208 effective search space used: 9007445208 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)