BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC7ZB08FM1.SCF screened BAC_end
         (888 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1216                                                        1479   0.0  

>3x_Contig1216 
          Length = 5132

 Score = 1479 bits (746), Expect = 0.0
 Identities = 790/802 (98%), Gaps = 2/802 (0%)
 Strand = Plus / Plus

                                                                        
Query: 89   ccccgttatatttctgaagttttggtcgtacgatagttcacggaatacttcatactcgta 148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4160 ccccgttatatttctgaagttttggtcgtacgatagttcacggaatacttcatactcgta 4219

                                                                        
Query: 149  tttgagttgcgactttaatgtctctagctgaataaattcatactgtgatgtaacaccatc 208
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4220 tttgagttgcgactttaatgtctctagctgaataaattcatactgtgatgtaacaccatc 4279

                                                                        
Query: 209  gccactctttgaagaaaggaagaatagaaggattataataaaaaatataatcctactgtt 268
            |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4280 gccactcggtgaagaaaggaagaatagaaggattataataaaaaatataatcctactgtt 4339

                                                                        
Query: 269  atctgtactcatattgggggttggggtcagcgcagtagctctggcggttgttgtcttccc 328
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4340 atctgtactcatattgggggttggggtcagcgcagtagctctggcggttgttgtcttccc 4399

                                                                        
Query: 329  ctaggatcgactattgtcagttatttaaagggtttcgatcttaacatttgatattagaaa 388
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4400 ctaggatcgactattgtcagttatttaaagggtttcgatcttaacatttgatattagaaa 4459

                                                                        
Query: 389  aaaatgtatttaaatgttttagctacagaaagaataagtgtgctgactatgaattgtacg 448
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4460 aaaatgtatttaaatgttttagctacagaaagaataagtgtgctgactatgaattgtacg 4519

                                                                        
Query: 449  aggaagaaaattacttaacggtattactcgtagcctacgcttcagaaaaggacgaattta 508
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4520 aggaagaaaattacttaacggtattactcgtagcctacgcttcagaaaaggacgaattta 4579

                                                                        
Query: 509  tgaattgagctatcaacagttagaacaaagtatttgaacatggtgcattgttataggttc 568
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4580 tgaattgagctatcaacagttagaacaaagtatttgaacatggtgcattgttataggttc 4639

                                                                        
Query: 569  aaagaccaattccttagtgcagataatagaattttgagttttgttattaatgtcggggtt 628
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4640 aaagaccaattccttagtgcagataatagaattttgagttttgttattaatgtcggggtt 4699

                                                                        
Query: 629  gagtgttaaatacttgttatatataattcagcgaaacaactactttgcattgttgaagct 688
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4700 gagtgttaaatacttgttatatataattcagcgaaacaactactttgcattgttgaagct 4759

                                                                        
Query: 689  caggctacgagttcatcataagtgtggcatgtgtctttttctttgatatgcgacgtaatt 748
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4760 caggctacgagttcatcataagtgtggcatgtgtctttttctttgatatgcgacgtaatt 4819

                                                                        
Query: 749  ccaagtattaatgtttgttaacgttcattaaagctcagtgctctaatatttgtaaagtac 808
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||
Sbjct: 4820 ccaagtattaatgtttgttaacgttcattaaagctcagtgctctaatatttgtaagttac 4879

                                                                        
Query: 809  cagtaataacaacgttctcc-aaacagattcattagggatatcaattttttgaccttcaa 867
            |||||||||||||||||||| |||||||| ||||||||||||||||| | ||||||||| 
Sbjct: 4880 cagtaataacaacgttctccaaaacagatccattagggatatcaattctatgaccttcag 4939

                                  
Query: 868  agc-aacaaggatcacatttcc 888
            ||| ||||| ||||||| ||||
Sbjct: 4940 agcaaacaatgatcacagttcc 4961


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7075
Number of Sequences: 1807
Number of extensions: 7075
Number of successful extensions: 47
Number of sequences better than 1.0e-20: 1
length of query: 888
length of database: 10,358,551
effective HSP length: 16
effective length of query: 872
effective length of database: 10,329,639
effective search space: 9007445208
effective search space used: 9007445208
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)