BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC7ZB12FM1.SCF screened BAC_end (949 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1790 1578 0.0 >3x_Contig1790 Length = 27369 Score = 1578 bits (796), Expect = 0.0 Identities = 840/853 (98%), Gaps = 2/853 (0%) Strand = Plus / Plus Query: 88 ccctgagttttcgagcagtttatcgtcatgtttaaacgtctcatcctatgaagagcttgt 147 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19926 ccctgagttttcgagcagtttatcgtcatgtttaaacgtctcatcctatgaagagcttgt 19985 Query: 148 caagaaaggtcttgctcaacattctcttttactctggattgtcaaagctcacaatgctaa 207 |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| Sbjct: 19986 caagaaaggtcttgctcaacatgcacttttactctggattgtcaaagctcacaatgctaa 20045 Query: 208 gttttataaaattccccactcgccttcattcgttagcgatacctttaatgatgtcgagcg 267 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20046 gttttataaaagtccccactcgccttcattcgttagcgatacctttaatgatgtcgagcg 20105 Query: 268 caatatcacgatcgaaaaggacgatgtcttagaatacatgcaattttaccaagcgttttt 327 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20106 caatatcacgatcgaaaaggacgatgtcttagaatacatgcaattttaccaagcgttttt 20165 Query: 328 ccctaatctctcacagatgtttcctaaagtgtacagtgtaggaagttggtccataaagga 387 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20166 ccctaatctctcacagatgtttcctaaagtgtacagtgtaggaagttggtccataaagga 20225 Query: 388 cttcattatcgctggtgtggtgatggaccgtattgtatggttgagaatggcaagcaatga 447 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20226 cttcattatcgctggtgtggtgatggaccgtattgtatggttgagaatggcaagcaatga 20285 Query: 448 atatttcctattcgaaaagcaaacatttgatttcaaaagatcctattcctaacagcagta 507 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20286 atatttcctattcgaaaagcaaacatttgatttcaaaagatcctattcctaacagcagta 20345 Query: 508 agagtggcgtagtaccaatccaatacgctgaggcttttatgtcagtagcctggataccta 567 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20346 agagtggcgtagtaccaatccaatacgctgaggcttttatgtcagtagcctggataccta 20405 Query: 568 taccactgactaactaatgctcatcttcacttgatatatcgncgaattcatttcattcag 627 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 20406 taccactgactaactaatgctcatcttcacttgatatatcgtcgaattcatttcattcag 20465 Query: 628 ttacttggattagncaagtgctgtcaagggccctttaatttactactggttcatttttca 687 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20466 ttacttggattagtcaagtgctgtcaagggccctttaatttactactggttcatttttca 20525 Query: 688 gaaagtccatccctcaattttgtccttctcacaacttcattgttcttcgtggtccgttta 747 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20526 gaaagtccatccctcaattttgtccttctcacaacttcattgttcttcgtggtccgttta 20585 Query: 748 taagcattgcatctttgaattctgcttaataagagattttg-ttggattcttttattaaa 806 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 20586 taagcattgcatctttgaattctgcttaataagagattttgtttggattcttttattaag 20645 Query: 807 gcgcgaaaaactttccactagttagagaacaaccataanactattacgaatatcaacatg 866 |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| Sbjct: 20646 gcgcgaaaaactttccactagttagagaacaaccataaaactataacgaatatcaacatg 20705 Query: 867 aggtttatagaaagaaaagtggaatttcaattttaatataaaatattagat-actatact 925 ||||| |||||||||||||||| |||||||||||||||||||||||||||| |||||||| Sbjct: 20706 aggttaatagaaagaaaagtggtatttcaattttaatataaaatattagataactatact 20765 Query: 926 atcttattaatag 938 ||| ||||||||| Sbjct: 20766 atcatattaatag 20778 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6246 Number of Sequences: 1807 Number of extensions: 6246 Number of successful extensions: 46 Number of sequences better than 1.0e-20: 1 length of query: 949 length of database: 10,358,551 effective HSP length: 16 effective length of query: 933 effective length of database: 10,329,639 effective search space: 9637553187 effective search space used: 9637553187 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)